Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0548 ATGGGGTTGGAATCTGTTGGAGATTTAGCCATTAACATGATTCTTAAGAAGTTAGAAGGCGAAGATGTTGCCAGAGTCGCTTGTGCCAGCAAAAGGTTTAGGTTTTCAGCTTCAGATGACACTCTTTGGACCAATCTCTGCTTCCATGAACTCGCTTTGACCCAACCCATCGATCATCTTGGAAACCCCTTCCCTTCCTTCAAGGAATGCTATCAAGCATGGAGAGGAGCTTTTGATATGTATCCATGGCCTCTTGTTAAGCGTGTGAAAAAGTGCTGGGATAGAATAAAGACCTGGTTGACCAATAACTTTCCTGAAGCTGAGGCCACTCTTTGTAAAGGGGCAACTGAAGCTGACATTCAGACGTTGGAGAATTTGTTAAAGGTGGAATTGCCACTTCCTACAAGGATCCTTTATCGCTTTCATAATGGGCAAGAAATCGTAAAAGCAAATCCAGAAACTAGTACATTTGGAAGTTCTTTGGGTCTAATTGGGGGTTACTCCTTCTATAATCATTTGGTGAATGTTTATCTATTGCCTATACGTCAGATAATCCAAGAAACTGAGCAAATTAGGCGTCACTTGAGCTTTTTAAGAAGATCCAAGTTTGTTCTTGTGGCTGCTTCATCCACTTTCCGTAGAAAGTTGTTTTTCCTCAACTGTTCCAATGGTCAACTATATGTTGGAACCAATAAACTTCATTCTGAAAAAGACATAATCCCTTGTGTACCTCAAGATCTGATAAGTTTACATCGGGAATTAAATATTGAAGAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGTCGTTTAGAACATGGCTTCATCAAACTCTGTGACAAAGAAAATGGAAGAAGCATTAATCTTTTCCCAGAAGAACCCCCTTTTTGTTCAACGGCTGTTACTAATGGTGTGAAGGTCCGTGCATCTGCATTGATTATCCCTGAGTTTATTGATCCTCAAGATGAGAATGAAAAGTACTTATTTGCTTATTCAATCCGCTTGTCCCTTGAACCGCAAGGATGCTTGATTAATGGAATGTCCTTCAACTCTTGTCAGCTCCATTGGAGGCACTGGATCATTCGTGCTAATGATGATGTTGTATCGGATTTCAATGGAGAAGCTGTTATAGGACAGTATCCACTTCTGCATCCTGGTGCAGAAGAATTTGTTTATCAGAGTTGCACACCTCTACCACTGCCATCAGGTTCCATTGAAGGTTCTTTTACTTTTGTACCTGGCAGCTTGGCATACCCAAAAGGAGACCCTTTTCTAGCTACAGTGGCACAATTCCCTCTCCAGCTGCCAGACTATATTTTCTGA 1332 0.4137 MGLESVGDLAINMILKKLEGEDVARVACASKRFRFSASDDTLWTNLCFHELALTQPIDHLGNPFPSFKECYQAWRGAFDMYPWPLVKRVKKCWDRIKTWLTNNFPEAEATLCKGATEADIQTLENLLKVELPLPTRILYRFHNGQEIVKANPETSTFGSSLGLIGGYSFYNHLVNVYLLPIRQIIQETEQIRRHLSFLRRSKFVLVAASSTFRRKLFFLNCSNGQLYVGTNKLHSEKDIIPCVPQDLISLHRELNIEEQQDAMLLWLEEHGRRLEHGFIKLCDKENGRSINLFPEEPPFCSTAVTNGVKVRASALIIPEFIDPQDENEKYLFAYSIRLSLEPQGCLINGMSFNSCQLHWRHWIIRANDDVVSDFNGEAVIGQYPLLHPGAEEFVYQSCTPLPLPSGSIEGSFTFVPGSLAYPKGDPFLATVAQFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0548 443 Gene3D - 8 99 - -
Pvu11g0548 443 Gene3D ApaG domain 299 443 IPR036767 -
Pvu11g0548 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Pvu11g0548 443 Pfam SMI1 / KNR4 family (SUKH-1) 114 227 IPR018958 -
Pvu11g0548 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Pvu11g0548 443 SUPERFAMILY F-box domain 12 73 IPR036047 GO:0005515
Pvu11g0548 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Pvu11g0548 443 Pfam ApaG domain 324 415 IPR007474 -
Pvu11g0548 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Pvu11g0548 443 SUPERFAMILY SMI1/KNR4-like 93 197 IPR037883 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0548 K10290 - gmx:100778108 760.755