Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0542 ATGCCTCGTTACAAGGACGAGTCCCCTGCAGTTCGGGTTTACACTGTCTGTGATGAATCCAGATATTTGATTGTGAGGAACATTCCAGAATTTGGCTGTGGGGATGATTTGCTCCAACTTTTTTCATCCTATGGAGAAGTCGAGGAGTGTAAGCCCATGGATGCAGAAGACTGTGATAAATACACTGATGTCTATTGGATCAAATTCCGCCTTGTCAGCAATGCTAGGTTTGCAAAAAGAAAATTGGATGATTTTGTTTTCTTCGGGAATAAACTGCAGGTTTCATATGCTTCCCAATTCGAGAGCCTGTCAGACACACAAGATAAATTAGAGGGAAGAAGAAGGGAGGTTTTAGCACGATTGAACCCTAGGAGATCTAAAGAGACCCCAGCCACAAGCTCTAATGCTCTGATTACATCAAATGTCAATAGTGCACAACATTTAGATTCTAATGCAAGGGATGTAGAAATCAAAGGAGGTTCAGGCAGTGGTAATTTTCCAATAAGAATTTCCTCTAATGAGGATTATTTTGCTTCACATTCCATGAATCAAACAGTAAATATTGTGCGGAATAAGCTTGATAAGATTCGATCAAGTGGTGAGCATACACAAGCTGGATCTGCGTCAAAGAAACAACGGGTTGATAATAGAAGGAGAATTTAA 663 0.4027 MPRYKDESPAVRVYTVCDESRYLIVRNIPEFGCGDDLLQLFSSYGEVEECKPMDAEDCDKYTDVYWIKFRLVSNARFAKRKLDDFVFFGNKLQVSYASQFESLSDTQDKLEGRRREVLARLNPRRSKETPATSSNALITSNVNSAQHLDSNARDVEIKGGSGSGNFPIRISSNEDYFASHSMNQTVNIVRNKLDKIRSSGEHTQAGSASKKQRVDNRRRI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0542 220 Gene3D - 16 114 IPR012677 -
Pvu11g0542 220 MobiDBLite consensus disorder prediction 126 143 - -
Pvu11g0542 220 MobiDBLite consensus disorder prediction 196 220 - -
Pvu11g0542 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 92 IPR000504 GO:0003723
Pvu11g0542 220 MobiDBLite consensus disorder prediction 122 143 - -
Pvu11g0542 220 CDD RRM_RBM48 11 110 IPR034264 -
Pvu11g0542 220 SUPERFAMILY RNA-binding domain, RBD 8 102 IPR035979 GO:0003676
Pvu11g0542 220 PANTHER UNCHARACTERIZED 3 220 IPR039599 -
Pvu11g0542 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0542 K24824 - gmx:100527829 387.111