Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0532 ATGGCCGTCAACGACGCCGATCAATCCAACAGGGCTCACAGGACCCGCCAATCCGGTTCCAAATCCGCCAAGAAGAAGAGTAAGAAGAAGCAGAATCAGGATGACGGAGGAGAGGATCAGAAACACCAAAACCCTAAGGCATTCGCCTTTTCTTCCTCCAACAAAGCCAAGCGGTTGCAATCACGTACCGTCGAGAAAGAGCAGCGCCGCCTTCACGCTCCCATCATTGACCGCTCCTACGGCGAAGTCGCACCATACGTCGTCGTCGTGCAGGGTCCTCCTCAGGTTGGGAAGTCACTTCTGATTAAATCTTTGGTTAAACATTACACGAAACATAATTTGCCCGATGTTCGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGCGGGTGCAGTTTGTGGAATGTCCGAATGATATCAATGGCATGATAGACGCGGCGAAGTTTGCTGATCTAGCGCTTCTTCTCATAGATGGGAGTTATGGGTTTGAAATGGAAACCTTTGAGTTCCTAAATATATTGCAAGTTCATGGGTTCCCAAAGGTCATGGGCGTTCTCACCCATCTTGATAAATTCAAGGATGTGAAAAAGCTGAGGAAAACAAAACAAAGACTTAAACACCGGTTTTGGACAGAGATATATGATGGCGCTAAACTATTTTACTTATCAGGCCTAATTCATGGAAAGTATGTTAAGCGGGAAGTTCACAATCTTGCTCGATTTATTTCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCACCCTTATGTTTTAGTTGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCACTCTAATGATAAATGTGATAGAAAAGTCACCCTTTATGGTTATCTTAGAGGATGTAATTTGAAAAAGGGCAATAAGGTACACATAGCAGGAGTGGGTGATTATAGCTTAACTTGTATTACTGCTTTACCCGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGGGATAAGGAAAGATTATTCTATGCTCCTATGTCTGGACTTGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAACGACCACCTTGTTCAATTCTCAAAAGTTGATGGTGAAAACTCTGCTATGACAAGCAAAGGAAAGGACAGAGATGTAGGAGAGGTTTTGGTGAAATCACTACAGAATACCAAATACTCTATCAATGAAAAGCTGGAGAACAGCTTTATCAGTCTTTTTGGTGAAAAGCCTAAAGTATCATCAGAAGCTCTCGCTGATGCACATGGCACAAACAATGATGTAGAACAGACTGAGGCTGTTATAAACTCAAAGGATTTGGATGGTTCAGAATCATCTGATCAGGATGAAGAGGACACCTTGAAAGAAAGTGAAGCTTCTGGTTCTGACGATGAAGATTCACCAAATAGTAATTCTTTGAATGGAGACCAAATACAAGAACATATTGAGTTTCATGATGGAAGACGAAGGCGGAGAGCAATATTTGGAAATGATACTGATCAAAGTGATGTGATGGATTCAGAAGGAGACGAGGATGGTGTTGCCAGTGATGATGATATTGCATCTTCTGATTCAGAATCTTCAGAAGAAGAGGCGGAAGATGATAACATTGACACAAATGAAGATGGCATGGGTAATGTTTCCAAGTGGAAGGAGTCTTTGGCAGAAAGAACTCTCTCACGGAAAGTTCCTGGCTTGATGCAACTTGTGTATGGGGAATCTACTAATAATTCAATCACTACAAACACACAGAATGATAATAGTGGAGACGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGAACTGAAAAAGCAAAACATGAGAGATGGATTGGATGATGATGGAGTGGTCAACACTGAGGATTGTTCCAAGTGTGCACAATTTGTGAATCAGAGATGGGATGAGGAGATTCGGAACCGCTTTGTGTCTGGCAATTTGGCAAAAGCTGCACTCAGAAATGCATTACAATCAGCTAATACTGAAGGAGAAAATGATGATGTCTATGGTGACTTTGAAGATTTGGAAACAGGAGAAAAACATGAGAATTATCGAACAGATGATGCTGCAACAACACTCAAGGGAGATGAATTGGAAGCTGAGGAGCGGAGGCTTAAGAAACGTGCTCTCCGTGCAAAATTTGATTCTCAATTTGATGAGGACCCTGGGTCACCAGAGGAAGACACTGGTAATGAAAGTGAACACAAGTTCCAGCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAGGAGGAGATCGAACTCCAGAAACAAAGGAATATAGCTGAACTCAATGATCTTGATGAAGATACCCGATTGGAGATAGAAGGCTTCCGAACAGGGACATACCTAAGGTTGGAGGTTGACGATGTTCCTTGTGAGATGGTTGAACACTTTGATCCCTACCATCCAATATTGGTTGGAGGGGTTGGTATAGGGGAGGAAAATGTTGGATATATGCAGACAAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGATCCAATTATTGTATCTGTAGGATGGAGGCGTTACCAGACAACCCCAGTTTATGCCATTGAGGATAGCAATGGAAGGCATCGAATGCTTAAGTACACTCCGGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACTGGGGTTGTAGCTGTTCAGAATTTATCAAACAATCAGGCAACATTTAGGATTACTGCCACTGCAGTTGTGCTTGAGTTTAATCATGCAGCAAGGATAGCGAAGAAAATCAAATTGGTTGGTTATCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATTAGGGGGCAGGTCAAGAAGGTCGCAAAAGAAGAAATAGGTAATCAAGCAAAAAGGAATGGTGGGCAAACTAAAGAAGGAATTGCTAGGTGCACTTTTGAAGATAAAATCCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTCCCTCAGTTTTATAATCCATTGACAACTGCATTACAGCCTCGTGAAAAGACCTGGAAAGGAATGAGGACCGTTGCAGAATTGAGAAGAGAACACAATCTTCCTGTTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAATCCATTGGTAATTCCCAAGTCTCTTCAAGCAAGTCTTCCCTTTGCCTCAAAACCCAAGGATATACCCAAGCGAAAGAAGCCCTTACTTGAAGAGAGAAGGGGAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTTCATGCTCTTGTTCAACATCTCCAGTTAATAAATAATGAGAAGATGAAAAAGCGAAAGTTTAAGGAAGAGAAGAAAAGGAAAGAACTTGAAGCAGAGAGAGCAAAAGATGAGCAGTTGTTGAAGAAACGCCGGAGAGAGGAAAGACGTGGGAAATACCGGGCAGAAGGCAAGCAGAACAAGAGAATTCGGAAAGCATAG 3573 0.4212 MAVNDADQSNRAHRTRQSGSKSAKKKSKKKQNQDDGGEDQKHQNPKAFAFSSSNKAKRLQSRTVEKEQRRLHAPIIDRSYGEVAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHSNDKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYSLTCITALPDPCPLPSAAKKKGLRDKERLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDGENSAMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSFISLFGEKPKVSSEALADAHGTNNDVEQTEAVINSKDLDGSESSDQDEEDTLKESEASGSDDEDSPNSNSLNGDQIQEHIEFHDGRRRRRAIFGNDTDQSDVMDSEGDEDGVASDDDIASSDSESSEEEAEDDNIDTNEDGMGNVSKWKESLAERTLSRKVPGLMQLVYGESTNNSITTNTQNDNSGDEESDDDFFKPIEELKKQNMRDGLDDDGVVNTEDCSKCAQFVNQRWDEEIRNRFVSGNLAKAALRNALQSANTEGENDDVYGDFEDLETGEKHENYRTDDAATTLKGDELEAEERRLKKRALRAKFDSQFDEDPGSPEEDTGNESEHKFQRGQANESSYFDKLKEEIELQKQRNIAELNDLDEDTRLEIEGFRTGTYLRLEVDDVPCEMVEHFDPYHPILVGGVGIGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAVQNLSNNQATFRITATAVVLEFNHAARIAKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQAKRNGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPREKTWKGMRTVAELRREHNLPVPVNKDSLYKKIERKPRKFNPLVIPKSLQASLPFASKPKDIPKRKKPLLEERRGRGVVMEPRERKVHALVQHLQLINNEKMKKRKFKEEKKRKELEAERAKDEQLLKKRRREERRGKYRAEGKQNKRIRKA* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 1 67 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 577 592 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 508 545 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 1139 1190 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 720 749 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 577 601 - -
Pvu11g0532 1190 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 1183 IPR039761 GO:0042254
Pvu11g0532 1190 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 28 42 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 484 502 - -
Pvu11g0532 1190 Gene3D - 86 248 IPR027417 -
Pvu11g0532 1190 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 469 483 - -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 1139 1179 - -
Pvu11g0532 1190 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 248 IPR030387 -
Pvu11g0532 1190 SMART DUF663_2 694 1023 IPR007034 -
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 441 556 - -
Pvu11g0532 1190 Coils Coil 1135 1174 - -
Pvu11g0532 1190 Coils Coil 758 778 - -
Pvu11g0532 1190 CDD BMS1 47 276 IPR037875 GO:0005525
Pvu11g0532 1190 MobiDBLite consensus disorder prediction 449 464 - -
Pvu11g0532 1190 PANTHER BNAC08G44910D PROTEIN 1 1183 - -
Pvu11g0532 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 222 IPR027417 -
Pvu11g0532 1190 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 704 1024 IPR007034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0532 Pvu-Chr11 4416398 4424759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0532 K14569 - gmx:100792176 1945.63