Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0527 ATGATATCTCCCACACTCTCATTCTCTTGCAATCCCAAAAACCCAAACTCGCTTTGCTTTTTTCCATTGCAGGGTTTTGCCAGCGCTTCCACTCTCAGGCTTTCGCCAACGCTTCCGCTTCGTTGCTCTCAGGAAAGAAGCATTGCAGCAGCACCAGTAGGGCTAGATGAAAGCATTGGGGGATTATCAACCACAAACGACCGCGTTTTGAGCGGCAACACTCCGGTGCTTCGGCAAAATGGCCTACCTCCTCTTGTCAGTGCATTGAAAGCTTCTGCTGAGCAAAATGTTGCCAGTTTTCACTTTCCTGGACATAACAGAGGGCATGCTGCTCCTGCTTCCTTGACTCGGCTTATCGGAACGAGACCCTATTCGCATGATTTACCTGAGCTTCCGGAGCTTGACAACCTCTTTTGTCCCCAGGGCCCCATATTGGAAGCACAGACTGAAGCAGCCAAACTGTTTGGATCATCACACACATGGTTTCTTGTTGGAGGTACTACTTGTGGGATTCAGGCAGCCATTATGGCTACCTGTTCCCCGGGGGATTTTCTGATTCTTCCAAGGAATTCCCATATATCAGCTATATCTGCTATGGTATTGTCTGGTGCAGTGCCTAAGTACATCGTTCCCGATTATGAAAATGATTGGGACATTGCTGGTGGTGTCTCTCCATTGCAGGTATTGAAAGCCATCCGAGGATTAGAAATGGAAGGGAAAAAAGCGGCAGCAGTCTTCATCACTTCGCCTACTTATCATGGTATTTGCAGTAACTTAAGCGAGATTTCTGAGCTGTGTCATTCTCGTAAAATTCCTTTGATTGTTGATGAAGCTCATGGGGCACATTTTGGATTTCATTCTGAGCTGCCAAGCTCAGCCCTCCAGCAAGGGGCTGATCTGACTGTACAGTCAACTCACAAAGTTCTATGCTCTCTTACTCAGTCATCTATGTTGCACATGTCGAGAAATATTGTAGATAAGGAAAAAATTGATAGATGTCTCCAAACACTTCAAACTACAAGCCCTAGCTATCTGCTTTTGGCATCCCTGGATGCTGCAAGAGCTCAACTTAGTGAACGCCCTGATGTTGCATTCAACCAAGCAATTGCATTAGCTTATGAAGCAAAGTACACGCTAAAATCAATTGCTGGTATATCAGTGCTTGAGAATTCAAGCTTTTCAACCTTTGCTGCAATTGATCCATTGCGTCTCACAGTAGGCTTTTGGAAGCTTCGTTTATCAGGTTATGAAGCAGACGAAATCTTATACAGAGATTATGGTGTTGTCTGTGAACTTGTTGGGAACAAATCTATTACTTACGCATTTAATCTCGGGACTTGTAGGGACCATGTCCATAGACTTCTATTGGGAATAAAGCATTTGGCTGCAACTTATTCTTCCTTTCAGCAACCTGAAGAGAAAGTGCGTAATGTTGATGCACCCTTTGATGATATTATCATGAGTTTGATCCCCAGAGATGCCTTTTTTGCTAGTAAAAGAAAAGTAACAATAAGGGAGAGCATAGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCGGGCATACCAGTATTGATCCCTGGTGAGGTTATTACGGAAAAAGCTGTTGATTATCTTCTGTATGTTAGGAGTAAAGGTGCTGATATTAGTGGGGCATCTGATCCCTTACTTTCTTCAGTAGTTGTCTGCAACGTAAAGTAA 1704 0.4419 MISPTLSFSCNPKNPNSLCFFPLQGFASASTLRLSPTLPLRCSQERSIAAAPVGLDESIGGLSTTNDRVLSGNTPVLRQNGLPPLVSALKASAEQNVASFHFPGHNRGHAAPASLTRLIGTRPYSHDLPELPELDNLFCPQGPILEAQTEAAKLFGSSHTWFLVGGTTCGIQAAIMATCSPGDFLILPRNSHISAISAMVLSGAVPKYIVPDYENDWDIAGGVSPLQVLKAIRGLEMEGKKAAAVFITSPTYHGICSNLSEISELCHSRKIPLIVDEAHGAHFGFHSELPSSALQQGADLTVQSTHKVLCSLTQSSMLHMSRNIVDKEKIDRCLQTLQTTSPSYLLLASLDAARAQLSERPDVAFNQAIALAYEAKYTLKSIAGISVLENSSFSTFAAIDPLRLTVGFWKLRLSGYEADEILYRDYGVVCELVGNKSITYAFNLGTCRDHVHRLLLGIKHLAATYSSFQQPEEKVRNVDAPFDDIIMSLIPRDAFFASKRKVTIRESIGEVSGELICPYPPGIPVLIPGEVITEKAVDYLLYVRSKGADISGASDPLLSSVVVCNVK* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0527 567 SUPERFAMILY Ornithine decarboxylase C-terminal domain 421 565 IPR036633 GO:0003824
Pvu11g0527 567 Pfam Orn/Lys/Arg decarboxylase, major domain 83 388 IPR000310 GO:0003824
Pvu11g0527 567 Gene3D - 83 362 IPR015421 GO:0003824
Pvu11g0527 567 PANTHER ARGININE DECARBOXYLASE 64 565 - -
Pvu11g0527 567 SUPERFAMILY PLP-dependent transferases 83 461 IPR015424 -
Pvu11g0527 567 CDD Orn_deC_like 84 381 IPR000310 GO:0003824
Pvu11g0527 567 Gene3D - 463 563 - -
Pvu11g0527 567 PANTHER ARGININE DECARBOXYLASE 64 565 - -
Pvu11g0527 567 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 500 546 IPR008286 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0527 Pvu-Chr11 4379492 4382123 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0527 - - gmx:100819143 936.406