Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0526 ATGGAGGAGCTAGAAATGGAAGGGAAAAAAGCAGCAGCAGTATTCATCACTTCACCTACATATCATGGTATTTGCAGTAACTTGAGCAAGATTTCGGAGCTGTGTCATTCTCGAAAAATTCCTTTGATTGTTGATGAAGCTCATGGCGCACACTTTGGATTTCATTCCAAACTTCCCAAGTCAGCTCTCCAGCAAGGAGCTGACCTAGTTGTGCAGTCCACTCACAAGGTTTTATGCTCTCTTACTCAGTCATCTATGCTGCACATGTCAGGCAACATTGTAGATAAGGAAAAAATTTGTAGATGTCTCCGAACTCTCCAAACCACAAGTCCTAGTTTTCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCTCAACTCAGTGAGAACCCTGATATTGCATTTAACCAAGCAATTGCATTAGCCGATGAGGCAAAGTGTGTGCTAAAACAAATCCCTGGTTACGAAGCAGACGAAATCTTATACAAGGATGAGGAAGTCATTGGTGAACTTGTTGGGAATACATGTATTACTTATGTACTTAATCTTGGGACTTGTAGGGAACATGTTGAGAGGCTTTTGTTGGGGATAAAGCGTCTAGCTGAAACATATGGTTCCATTGAACAAGCTGAGAAGAAAGTGGTGAATGTTGATGCACCCTTTGATGATATAATGATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAGGTAAAAGGAAAGTGGCAATAAGGGAGAGCATTGGTGAGGTTGCAGGGGAGCTTATATGTCCATACCCTCCAGGTGTACCAGTGTTGATCCCTGGTGAGGTTATAACTGAAAAAATTGTTGATTATCTGCTTCATGTTAGGAGTAAAGGTGCTGAAATCAATGGAGCATCTGACTCCTCCCTTTCTTCAATAGTTGTTTGCCGTAAATTATGA 918 0.4172 MEELEMEGKKAAAVFITSPTYHGICSNLSKISELCHSRKIPLIVDEAHGAHFGFHSKLPKSALQQGADLVVQSTHKVLCSLTQSSMLHMSGNIVDKEKICRCLRTLQTTSPSFLLLASLDAARAQLSENPDIAFNQAIALADEAKCVLKQIPGYEADEILYKDEEVIGELVGNTCITYVLNLGTCREHVERLLLGIKRLAETYGSIEQAEKKVVNVDAPFDDIMMSLIPRDAFFAGKRKVAIRESIGEVAGELICPYPPGVPVLIPGEVITEKIVDYLLHVRSKGAEINGASDSSLSSIVVCRKL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0526 305 Pfam Orn/Lys/Arg decarboxylase, major domain 10 146 IPR000310 GO:0003824
Pvu11g0526 305 Gene3D - 204 301 - -
Pvu11g0526 305 PANTHER ARGININE DECARBOXYLASE 151 303 - -
Pvu11g0526 305 PANTHER ARGININE DECARBOXYLASE 1 153 - -
Pvu11g0526 305 Gene3D - 1 131 IPR015421 GO:0003824
Pvu11g0526 305 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 238 286 IPR008286 GO:0003824
Pvu11g0526 305 PANTHER ARGININE DECARBOXYLASE 1 153 - -
Pvu11g0526 305 PANTHER ARGININE DECARBOXYLASE 151 303 - -
Pvu11g0526 305 SUPERFAMILY PLP-dependent transferases 8 204 IPR015424 -
Pvu11g0526 305 SUPERFAMILY Ornithine decarboxylase C-terminal domain 162 302 IPR036633 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0526 Pvu-Chr11 4376727 4377860 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0526 - - pvu:PHAVU_011G051300g 600.897