Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0513 TCTGGGTTTTGGGGAAAGGAAGGTCAACGGCCATGTCAAATTATTAGCCCACAGTTGGAGGTTGGGGGTCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGAAGTAACTATAAATGGTCGAGAGATTACCAAAAAAGAGCTTTGGATACTGAAGTGGGCAAGAGTGCCATGTGAGGGAACAACTGACTTTTGGGTGAGCCAAGATGGATCATACATGGAAGTGGGACAGAAGAATGTGAAGGGGCACATATGGGAGAAGTCTACAGTGAAGCTTGCTTCTCTAATTCTGTCCCTGCCAGTTCCTTCTAGTTCCTTAACTCCAGCTGACGAAGGAGAAAATGAAATTAGCAAACACAACATTCAACAGAAAATGCTTCACAAATTTTTACTTGTTGGTTCTGAAAATTCTGGAACATGTACCATATATAAACAGGCCAAGCTTCTGTATAATGCTCCTTTCTCTGTAACCGAGCTCCAAAACATCAAGCTGGTAATTCAAAGCAACTTGTATAGGTACCTTGGCATCATATTAGAGGCACGAGAGTTTTTTGAAGAGAGTTTGTTTGAAAAAAGTAACGAACAACTTGTTGGTGAATCAACTTCTTCTGGGATTACTGGAGAAATTATTGACTCGACAACCTATTCTATTAGTCCAAGACTAAGAACTTTCTCCGATTGGCTACTCAAATACATGATGTCAGGCAACTTGGATGCAATATTTCCAGCTGCTGCTCGTGAATATGCGCCAGTGCTGGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACATACAAAAGGAGAAATGAAATAAAAAATCTGCCAAAAAGTGCGAGCTATTTTCTTGAGCGGGCTGTTGAAATTTCCAGAATAGATTATGAACCCTTGGACATGGACATCTTGTATGCTGAGGGAATAACCTTATCAAATTCCCTTTCTTCTATGGAATTTTCATTTCCTGTGTCAGGTCATGAGGACTCATTGGACCCTGTGTATCAACATGATCCTTCACTCAGGTACCAGCTCATCAGAGTGCATCCAAAAAGCCTCGGAGAAAACTACAAGTGGTTGGATATGTTTGAAGACACTGATGTAGTCTTATTCTCAGTGGCCTTAACTGACTATGACGAGTACACGGTAGACAGTAATGGAGTTGCTACCAACAAAATTTTAGCAGCCAAACATCTCTTTCAAAATATCTTCACTCATAGAGTCTTCAGCAACACTAAATTTCTTCTAATATTGACCAAGTTTGATCTGTTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAATGTGAATGGTTTTGGGACTTCAATCCAGTGATCAGCCACAACAATAAAACCGCTGGTATTGGTAAAAGTACCAACCATCCTCCACTGGCTCAACGTGCTTTTCAATACATTGGTATGAAGTTCAAGAGCTGGTTCAATTCTCTAACTGGTAGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACCTGCTACTGTTGATGAAGCTCTTAGATATGGCAGAGAGGTTATGGTGTGGGAAAAATGGGACCCCTCTTTGATAAATGAGAAGTCTGAGATAACATCCACAACTTTTGATGCAAGCTATGAATAA 1608 0.4098 SGFWGKEGQRPCQIISPQLEVGGHLQRNASNGKTEVTINGREITKKELWILKWARVPCEGTTDFWVSQDGSYMEVGQKNVKGHIWEKSTVKLASLILSLPVPSSSLTPADEGENEISKHNIQQKMLHKFLLVGSENSGTCTIYKQAKLLYNAPFSVTELQNIKLVIQSNLYRYLGIILEAREFFEESLFEKSNEQLVGESTSSGITGEIIDSTTYSISPRLRTFSDWLLKYMMSGNLDAIFPAAAREYAPVLEELWRDAAIQATYKRRNEIKNLPKSASYFLERAVEISRIDYEPLDMDILYAEGITLSNSLSSMEFSFPVSGHEDSLDPVYQHDPSLRYQLIRVHPKSLGENYKWLDMFEDTDVVLFSVALTDYDEYTVDSNGVATNKILAAKHLFQNIFTHRVFSNTKFLLILTKFDLFEEKIEQVPLTQCEWFWDFNPVISHNNKTAGIGKSTNHPPLAQRAFQYIGMKFKSWFNSLTGRKLFVSLVTGLEPATVDEALRYGREVMVWEKWDPSLINEKSEITSTTFDASYE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0513 535 SUPERFAMILY Transducin (alpha subunit), insertion domain 154 303 IPR011025 GO:0007165
Pvu11g0513 535 Gene3D - 333 510 IPR027417 -
Pvu11g0513 535 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 1 531 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 PRINTS Alpha G protein (transducin) signature 128 143 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 PRINTS Alpha G protein (transducin) signature 293 315 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 PRINTS Alpha G protein (transducin) signature 363 391 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 PRINTS Alpha G protein (transducin) signature 411 420 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 SMART galpha_1 113 493 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 Gene3D - 157 304 IPR011025 GO:0007165
Pvu11g0513 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 503 IPR027417 -
Pvu11g0513 535 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 1 531 - -
Pvu11g0513 535 ProSiteProfiles G-alpha domain profile. 125 525 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu11g0513 535 Pfam G-protein alpha subunit 114 503 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0513 Pvu-Chr11 4287250 4290393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0513 - - gmx:100791124 887.486