Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0507 ATGTGGAAGAAAATGGGTTTTGAAGAAGAAGCAGTAGTTCAATTGATCAACTCTGATTTCAGAGACCTAAGTCTAGCTGCTAATCAATTAGGCAATCACCTCGTCAAACTTGGTGGCATAGGCTTTGGAGCCTCTTTTTTCGGATTGATTGCTGCCATTGCTGCTATTTATCTGTTAATTTTGGATCGTACAAACTGGAAGACAAATATTCTCACAGGACTACTCATTCCATACATTTTCTTCAGCTTGCCTTCAATAGTTTTTGATGTCTTCAGAGGAGAGATTGGAAAATGGATTGCTGTTGTTGCTGTTGTATTGCGCCTTTTCCTTCCAAGACACTTCCCTGATTGGCTGGAATTGCCTGGTGCTTTGATTCTTCTTATCGTTGTAGCTCCTTCTCTAATTGCAAGCACCTTTAGAAACAACATTGTTGGGGTGGTAGTGTGTCTCATCATTGCATGCTATCTGCTGCAAGAACATATTCGGGCTTCTGGTGGTTTTAGAAACTCCTTCACTAAAGCCCACGGCATATCAAATTCCATTGGCATAATACTTCTGTTGGTCTATCCCATCTGGGCGTTAGTGGTCATACTCTTTTAG 600 0.4117 MWKKMGFEEEAVVQLINSDFRDLSLAANQLGNHLVKLGGIGFGASFFGLIAAIAAIYLLILDRTNWKTNILTGLLIPYIFFSLPSIVFDVFRGEIGKWIAVVAVVLRLFLPRHFPDWLELPGALILLIVVAPSLIASTFRNNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSIGIILLLVYPIWALVVILF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0507 199 Pfam Cold acclimation protein WCOR413 8 186 IPR008892 GO:0016021
Pvu11g0507 199 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 2 198 - -
Pvu11g0507 199 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 2 198 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0507 Pvu-Chr11 4239239 4241760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0507 - - gmx:100811430 306.219