Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0502 ATGGATGAAGTACCTGGCTCCTTGGGCACCAGCGCTAGCTTCAGTCTGAGAATTGGCCAGACCATGTTCTCCTCTGCTTCCCTTCTCTTCATGTCTCTGGGGGTTGAATTCTACAGCTACACGGCTTTCTGCTATTTGGTGACAATTATGGGGTTGGTCATACCATGGAGTTTCTCATTAGCACTAGTAGATGGATATTCGGTTCTTCTCAAATGCCCCATTCGTCAACCAGGAATTCTATTGATTATTGTTGTGGGAGATTGGGTATTATCAACCCTCACACTGGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTTCTGCTCAGTACTCATGGGTCATTTTGCCCTCCAAAGCTCTGTAGCAGCTGCCAAAGATGGTTAGTTTGA 390 0.4667 MDEVPGSLGTSASFSLRIGQTMFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFSLALVDGYSVLLKCPIRQPGILLIIVVGDWVLSTLTLAAACSTASVVDLLLSTHGSFCPPKLCSSCQRWLV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0502 129 Pfam Casparian strip membrane protein domain 9 121 IPR006702 -
Pvu11g0502 129 PANTHER CASP-LIKE PROTEIN 5C3 1 124 - -
Pvu11g0502 129 PANTHER CASP-LIKE PROTEIN 5B3 1 124 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0502 Pvu-Chr11 4213534 4218682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0502 - - pvu:PHAVU_011G049100g 243.817