Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0490 ATGAAGGCTTTCAGTGCCATAAACTCCACAAATCCATGTCTTCCCAAAACCCATTTCCTCAAAGTCCCTATCTTTCACCCCTTCTTCAAATTCAATCCATTCTCACACTCATACAACACCCATGCCCATGCTGCAAACAGAGCTCACAAGCTTCCACTCACCATCAGCTGCAAGCTGAAAAGCTCCCAAGATGTCAAAAACAAAGGGAAGAGCGTGTCCCAGAAGATTGTCTTATCAGAAACTTCCCCTCCACCACTCACTGAGGATGATAGCACCAATTCTGACAGTGGGGATGTTCCACAAAGCTCAATGAAAAAAAAGGGAGGCCCTTTTGAGGTGCTCATCGTGTTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCATTGGCTATTGCGGACATGTTCGTTGCTGCTGCTTTGATGGCTTTGGGAACACTTATTGAACAAGGTGAAGCCCCTGACTTTTATATCCAGAAATACTCTGAAGATAATCCTGTATTTGGATTTTTTACTTGGAGATGGATTCTCGCCCTTGGTTTTGATCACATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCCCTCATGGCCTGCACATACACAACTCAACTCCCCATCATCAAGGTTTCAAGAAGATGGTCATTTTTGCATTCTGCTGAGGCCATACGCAAGCAAGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATTTTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCCTTTAAAGGACTTGCAGGTCGGTTGGCCCCTGTTGGAGTTCATATAGCACTGCTACTTGTAATGGCTGGAGGAACTGTTAGTGCTGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTAGGTGATGTTCTGGCTCCTTCCGGATTTCTCTCTTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTTTGAGAGTGGAGAGGTTTCACAATTCCACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAAACAATCAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATATCAGACAGATTGGAGTATTTCTGCTCTGCAAATTCTTAAGGATAATGAAGGACCGTATAACTTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCTATGCTTGCTCGTGATCTACAGTCAATCGTCCTTTACGATAAGGAAGGAAAATTTGTGGGAGTTAGACGGCCTAATTCAAACCTCCCAATCAATATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGACCCAGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCTTCGTTGGAGGAAAGACTAACAGAGCAAAGATAGAGTTTCCAGAGGAGATGAACCGCTTACTTGATAAAGTCCCTGAAATTGTTGAATCAACTCTATCTAAGCAAGCTGATAGCATTAGTGGTTAG 1701 0.428 MKAFSAINSTNPCLPKTHFLKVPIFHPFFKFNPFSHSYNTHAHAANRAHKLPLTISCKLKSSQDVKNKGKSVSQKIVLSETSPPPLTEDDSTNSDSGDVPQSSMKKKGGPFEVLIVFRRKTLQILSSLPLAIADMFVAAALMALGTLIEQGEAPDFYIQKYSEDNPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMACTYTTQLPIIKVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLAPSGFLSSPTEAFNTEIHVNRFYMDYFESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFVGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKIEFPEEMNRLLDKVPEIVESTLSKQADSISG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0490 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 83 555 IPR023494 -
Pvu11g0490 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 118 547 IPR023494 -
Pvu11g0490 566 MobiDBLite consensus disorder prediction 66 105 - -
Pvu11g0490 566 Pfam ResB-like family 430 542 IPR007816 -
Pvu11g0490 566 Pfam ResB-like family 130 393 IPR007816 -
Pvu11g0490 566 MobiDBLite consensus disorder prediction 66 101 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0490 24 561 Miscellaneous Gene Families AT1G49380 66.912 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0490 K07399 - gmx:100807003 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0490 11 4135609 4141016 Pvu11g0490 11 4135609 4141016 ECH