Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0486 ATGGAAGCATACAAGAAGAAGGTGATGATTGTGGTGATGATGGTGTTGGGCATTGTGATGAGTGGATCCAATGCGCAGTACTCGTTTTGTCGCATGCCCAAAGATGGGTTGAAGTCATGCTTAGCAAGTGTGAGTGGGGACAACCCTGTTGATCCCACCTCTGATTGTTGCTTAGCCATTGCAAAGGCTGATCTGCAGTGCTTCTGCCGCTACAAGGATTCGGGATTGCTCTCTATCTATGGTGTTGATCCCAACAAATGCATGGAACTCCCTGTTAAGTGCAAGGTTGTCGACTCTTTCCACTGCTAG 309 0.479 MEAYKKKVMIVVMMVLGIVMSGSNAQYSFCRMPKDGLKSCLASVSGDNPVDPTSDCCLAIAKADLQCFCRYKDSGLLSIYGVDPNKCMELPVKCKVVDSFHC* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0486 102 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Pvu11g0486 102 Gene3D - 27 102 IPR036312 -
Pvu11g0486 102 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 100 IPR036312 -
Pvu11g0486 102 CDD nsLTP_like 30 102 IPR044741 -
Pvu11g0486 102 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Pvu11g0486 102 Pfam Probable lipid transfer 12 101 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0486 Pvu-Chr11 4104244 4104942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0486 1 102 Acyl Lipid Metabolism Gene Families AT5G48490 36.275 2.17e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0486 - - gmx:100305636 158.303