Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0482 ATGATTGGGCGCAGAGACAGAGAGGGACCCCTGATGAGGAACAACAGCACAAACTCTCTACGCAAATCAAGGGTCCTAACCGCAGTTGCAATTGGCGTCCTTATTGGATGCGTCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTCTCTGACTCTGTCGCTGCCAATCGCCGCCTCCCTCAGGCGGGATCCATGACCCAGGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACTTATTGAAATCAGAGTTTGTAGCGGTATCAGAGAAGAATGCTGAGCTGAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGCACAAGGGGAAGACCAGGCTCAAAAGCAGTTCCTTACGCTAGGTAAACAGCAGAAGGCTGGACCTTTTGGTACTGTAAAGGGATTGAGAACCAACCCTACTGTTGTTCCTGATGAGTCTGTGAACCCGAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTGGACTGGCAAACACCAATGTAAAGGAGATGCTAGAGGTCTGGTTCACCAGCATCAAGAGAGTTGGCATAACCAACTATCTAGTTATTGCTTTAGACGATGAGATTGCAAAGTTTTGTGAATCAAATCAAGTGCCAGTGTATAAAAGAGATCCAGATGATGGTGTTGATATAATTGGAAGAACCGGGAGTAACCATGCTGTCTCTGGTCTAAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGATGTCGACATTGTATATTTGCAGAATCCATTTGATCATCTATACCGGGATTCAGACGTGGAGTCCATGAGCGATGGTCACAATAACATGACAGCTTACGGCTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTAGATATGCTCATACTATGAGGATATGGGTTTTCAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATAGAGCTTTTGGATCGCGTGGCAACACGACTTTCGAAAGAGAAAGCATGGGACCAGGCTGTTTTCAATGAGGAACTCTTTTACCCCTCACATCCTGGTTATGAGGGGCTTCATGCTGCCAAAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAATTGAAGCCTGTAATTATTCACGTGAATTATCACCCTGCTAAGCTTCCACGAATGAAAGCAATTGTTGAATACTACATTGATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGATGGCTCAGAATGGTAA 1317 0.4412 MIGRRDREGPLMRNNSTNSLRKSRVLTAVAIGVLIGCVFAFLFPNGFFVSDSVAANRRLPQAGSMTQENSAGCESSDRVNLLKSEFVAVSEKNAELKKQVRELTERLRLAAQGEDQAQKQFLTLGKQQKAGPFGTVKGLRTNPTVVPDESVNPRLGKILEKVAVKRELIVGLANTNVKEMLEVWFTSIKRVGITNYLVIALDDEIAKFCESNQVPVYKRDPDDGVDIIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVFNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYEGLHAAKRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPAKLPRMKAIVEYYIDGKQDALKPFPDGSEW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0482 438 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 170 419 IPR029044 -
Pvu11g0482 438 PANTHER ARABINOSYLTRANSFERASE RRA3 13 435 IPR044290 GO:0016757|GO:0080147
Pvu11g0482 438 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 435 - -
Pvu11g0482 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 373 IPR029044 -
Pvu11g0482 438 Coils Coil 79 113 - -
Pvu11g0482 438 Pfam Nucleotide-diphospho-sugar transferase 193 413 IPR005069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0482 Pvu-Chr11 4075952 4078721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0482 K20783 - gmx:100804189 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0482 11 4075952 4078721 Pvu11g0482 11 4075952 4078721 ECH