Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0479 ATGACTGAGGGAAAGGGAATTGAAGCTCGGAAAATAGTTGGGGATTTCAATTCTTCCAAGAAGCCCAAAAGAAACAAGTATGCTTTTGGTTGCGCTATATTGGCCTCCATGACATCCATTTTACTTGGCTATGATATTGGGGTGATGAGTGGTGCAGCCATATACATAAAGAGGGACCTAAAGGTGTCGGACGTGCAAATAGAGATACTGATGGGAATCATCAACCTCTACTCTCTCATAGGCTCATGCTTGGCGGGCAGAACCTCCGACTGGATAGGGCGGCGATACACCATTGTCTTCGCCGGCACCATCTTCTTCGCCGGAGCACTTCTCATGGGCTTCTCCCCCAACTATCTCTTTCTCATGTTCGGGCGTTTCGTGGCGGGCATCGGCATCGGCTACGCCCTCATGATCGCTCCGGTCTACACCGCCGAAGTCTCCCCAGCCTCCTCCCGTGGCTTCCTCACTTCCTTTCCCGAGGTCTTTATTAATGGAGGGATATTGCTGGGATACGTATCCAACTTTGCATTTTCAAAGATGACATTGAAGCTGGGATGGCGAATGATGCTCGGAATCGGTGCAGTTCCGTCGGTGCTCCTGACACTGGGAGTGTTGGCGATGCCTGAATCTCCGCGGTGGCTGGTGATGAGGGGCCGTTTGGGAGAGGCGACGAAAGTGCTTAACAAAACCTCCGACAGCAAGGAAGAAGCTCAACTGAGGCTAGCCGAAATCAAACAAGCCGCAGGGATCCCGGAGAGTTGCAACGACGACGTCGTTCAGGTAGCGAAACAAAGCACGGGCGAGGGTGTTTGGAAGGAGTTGTTCCTCTATCCAACTCCTACGATTCGTCACATCTTAATTTCGGCGATTGGAATTCACTTCTTCCAACAAGCGTCGGGTGTGGACGCCGTCGTTTTATACAGCCCCACAATCTTCGAGAAGGCTGGGATCACCGATGACACGCAGAAGCTTCTTGCAACCGTGGCCGTTGGAACGGTGAAGACTTTGTTCATCTTGGTCGCTACTTTTATGTTGGACCGCGTGGGTCGTCGACCCTTGTTATTGTCTAGTGTTGGAGGCATGGTGCTCTCGCTTCTGACACTCGCAATCAGCCTTACCATCATTGATCGATCGGAGAGTAAACTAATGTGGGCCATTGGATTGAGTATAACAATGGTGTTGGTCTACGTGGCCACATTTTCCATCGGTGCGGGACCCATCACGTGGGTTTACAGCTCTGAGATCTTTCCGTTGAGGCTGCGGGCGCAGGGTGCAGCTGCGGGTGTTGTGGTGAACAGAACCACAAGTGGGGTTATTTCAATGACTTTTTTGTCCCTCACTAAAGCCATCACTATTGGTGGAGCTTTCTTCCTCTATTGTGGGATTGCTGTGGTTGGGTGGTTATTTTTCTTCATTGTGCTTCCTGAGACGCGGGGTAAAACACTCGAAGACATGGAGGGGTCTTTCGGTACTTTCAGAGCCAAATCCAACAACGGGGTTGAAAATGAAAATGCCAAAGTTCCACAAGTTCAGTTGGGGACCAATCTCCACGCTTAG 1557 0.5087 MTEGKGIEARKIVGDFNSSKKPKRNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFAGALLMGFSPNYLFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYVSNFAFSKMTLKLGWRMMLGIGAVPSVLLTLGVLAMPESPRWLVMRGRLGEATKVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVQVAKQSTGEGVWKELFLYPTPTIRHILISAIGIHFFQQASGVDAVVLYSPTIFEKAGITDDTQKLLATVAVGTVKTLFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAISLTIIDRSESKLMWAIGLSITMVLVYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYCGIAVVGWLFFFIVLPETRGKTLEDMEGSFGTFRAKSNNGVENENAKVPQVQLGTNLHA* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0479 518 PANTHER SUGAR TRANSPORTER 14 508 - -
Pvu11g0479 518 TIGRFAM SP: MFS transporter, sugar porter (SP) family 25 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 Pfam Sugar (and other) transporter 31 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu11g0479 518 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Pvu11g0479 518 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0479 518 SUPERFAMILY MFS general substrate transporter 20 486 IPR036259 -
Pvu11g0479 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Pvu11g0479 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 508 IPR045262 GO:0015144
Pvu11g0479 518 Coils Coil 227 247 - -
Pvu11g0479 518 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0479 518 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0479 518 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0479 Pvu-Chr11 4042148 4044797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0479 19 515 Organic Solute Cotransporters AT3G18830 71.713 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0479 - - gmx:547958 876.315