Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0478 ATGACTGAGGATAAGGTAGTTGAAACTGATAAAACACTTGAAGATTTCGATCCTCCCAAGAAGCACAAAACCAACAAGTATGCTTTTGGTTGCGCTATATTGGCCTCCACTACATGCATTTTACTTGGTTATGATATTGGGGTGATGACCGGTGCAGCCATATACATAAAGAGAGACCTAAAGGTGTCGGACGTGCAAATAGAGATACTGTTGGGAATCATCAACCTGTACTCACTCATAGGCTCATGCGTGGCCGGCAGAACCTCCGACTGGCTAGGGCGGCGATACACCATTGTCTTCGCCGGCACCATCTTCTTCGCCGGAGCACTTCTCATGGGCTTCTCCCCCAACTATTCCTTTCTCATGTTCGGGCGTTTCGTGGCGGGAATCGGCATCGGCTACGCCCTCATGATCGGCCCTGTGTACTCCGCCGAGGTCTCCCCAGCCTCCTATCGCGGCTTCCTCACTTCCTTCACCGAGGTTTTTATTAATGGAGGGATATTGCTTGGATACATATCCAACTATGCATTTTCAAAGATGACATTGAAGTTGGGATGGCGAATGATGCTTGGAATCGGTGCAATTCCTTCGATACTCTTAACGGTGGGAGTGCTGGTGATGCCGGAATCTCCGCGGTGGCTGGTGATGAAGGGACGTTTGGGAGAGGCAAGGATAGTGCTCAACAAAACCTCTGACAGTAAGGAAGAAGCTCAACAGAGGCTAGCTGATATCAAACAAGCCGCAGGGATCCCAGAGAGTTGCAACGACGACGTCGTTCAGGTGACCAAACAAAGTTCCGGCAACAACGTATGGAAAGAGTTGTTCCTTTATCCAACGCCTGCGATTCGCCACATCTTAATTGCAGCCCTCGGGATTTACTGCTTCCAACAAGCGTCGGGGGTGGACGCCGTCGTTTTATACAGCCCGAGAATCTTCGAGAAGGCTGGGATGACCGATGACACGCATAAGCTTCTTGCAACTGTGGCCGTTGGATTCGTGAAGACCACGTTCATCTTGGTTGCTACTTTTATGATGGACCGCGTGGGTCGTCGTCCCATGTTATTGTCTAGTGTTGGAGGCATGGTGGTCTCGTTTCTCATACTCGGAATCGTCTTTACCATCATTGAACAGTCGGAGAGTAAACCGATGTGGGCCATTGGATTGAGCATAACGATGGTGTTGGTCTTCGTGGCGACGTTTTCCATCGGTGCGGGACCCATCACGTGGGTTTACAGTGCTGAGATCTTTCCACTGAGATTGCGAGCGCAGGGTGTGGCTGCGGGTGTTGTTGTGAATAGAATCACAAGTGGGGTTATTACAATGACTTTTTTGTCCCTCACTAAAGCCATCACTGTTGGTGGAACTTTCTTCCTCTACTGTGGTATTGCTGCAACTGGGGGTTTATTCTTCTACATCGCGCTTCCTGAGACACGGGGTAAAACACTTGAAGACATGGAAGCCTCTTTCGGTAATTTCAACCTCAAATCCAACAAGGGACTTGAAAATGGAAATGCCAAACTCACGCAACTCTAG 1533 0.4938 MTEDKVVETDKTLEDFDPPKKHKTNKYAFGCAILASTTCILLGYDIGVMTGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSCVAGRTSDWLGRRYTIVFAGTIFFAGALLMGFSPNYSFLMFGRFVAGIGIGYALMIGPVYSAEVSPASYRGFLTSFTEVFINGGILLGYISNYAFSKMTLKLGWRMMLGIGAIPSILLTVGVLVMPESPRWLVMKGRLGEARIVLNKTSDSKEEAQQRLADIKQAAGIPESCNDDVVQVTKQSSGNNVWKELFLYPTPAIRHILIAALGIYCFQQASGVDAVVLYSPRIFEKAGMTDDTHKLLATVAVGFVKTTFILVATFMMDRVGRRPMLLSSVGGMVVSFLILGIVFTIIEQSESKPMWAIGLSITMVLVFVATFSIGAGPITWVYSAEIFPLRLRAQGVAAGVVVNRITSGVITMTFLSLTKAITVGGTFFLYCGIAATGGLFFYIALPETRGKTLEDMEASFGNFNLKSNKGLENGNAKLTQL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0478 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Pvu11g0478 510 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 506 IPR045262 GO:0015144
Pvu11g0478 510 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 PANTHER SUGAR TRANSPORTER 15 506 - -
Pvu11g0478 510 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0478 510 Gene3D MFS general substrate transporter like domains 20 491 IPR036259 -
Pvu11g0478 510 SUPERFAMILY MFS general substrate transporter 17 486 IPR036259 -
Pvu11g0478 510 Coils Coil 227 247 - -
Pvu11g0478 510 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0478 510 TIGRFAM SP: MFS transporter, sugar porter (SP) family 18 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0478 510 Pfam Sugar (and other) transporter 32 489 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0478 Pvu-Chr11 4022896 4025245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0478 14 508 Organic Solute Cotransporters AT3G18830 67.137 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0478 - - vun:114168664 867.455