Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0470 ATGGCTTCACATTCATTCCTCCTCCAACTTTCCCTCATCATCACTGCACTCCACACTGCTGTTTCGCAACCCTTCATCGGCGTGAACTACGGCCAGGTCGCCGACGACCTTCCGGCGCCGGAGGTCTCGGCAGAGCTTCTCAAGTCAACGACCGTCGGAAAAGTCCGCCTTTACGGTGCGGATCCGGCGATCATAAAGGCGCTAGCGAACTCCGGGATTGGAATCGTCATCGGGGTGGCCAACGGCGACATTCCGAGTTTGGCCTCTGATCCTGACTCGGCGACTCAGTGGGTCAACGCGAACGTGTTGCCACATTACCCCGAAAGCAACATCACTCTGATCGCCGTCGGCAACGAGATCATAAAGTCCGGCGACGATGGCCTCGCCTCGCAGCTTCTCCCGGCGATGCAAAATGTCCAGAATGCCCTCAACTCGGCCTCACTCGGTGGCAAAATAAAAGTTTCGACGGTGCACTCTATGGCCGTGTTGACTCAGTCGGAGCCTCCCTCGGCCGGGTCGTTCGACCCGGCTTTGATGGATATCCTCCAACCGTTGGTAGCTTTTCTGAAGAATAACGAGTCACCTTTCGCCATCAACCCATACCCGTTCTTCGCTTACCAGAGCGACCCGAGACCCGAAACACTCGCATTCTGTCTATTTCAACCAAATTCGGGTCGGGTCGATCAGGGTAACGGGAATGTTTATTCCAACATGTTGGACGCTCAGGTGGATGCTGTGCAGAGTGGTTTGAGCAGTATGGGGATGGAGGACATGGAGATTGTGATTGCTGAGACAGGATGGCCCTCTCGTGGGGACACTAATGAAGTAGGAGCCACTCTTGAAAACGCCAGGGCCTATAATGGAAACCTCATTGCACACCTTAGATCAATGGTTGGGACTCCTTCCATGCCTGGCAAATCTGTTGACACATTCATTTTTGCACTCTATGATGAGGATTTGAAGCCTGGTCCAGCATCTGAGAGAGCATTTGGCCTGTTCAAAACTGATCTTACCATGTCATATGATGTTGGTCTAGACAACTCTGCCTCAAGCCACAAGAATCCACCAACTGGTCCTGTTACTCCAGCTCCCAAAAGGGAAACAGAATGGTGCATCCCAAAAGTGGAAGTGAGTGAAGCCCAATTGCAGACAAATGTTGATTATATCTGTGGTAGCCAAGTTATAGATTGTGGACCAATTCAACCAGGAGGAGCTTGTTATGAACCTAACACGGTCTTATCTCATGCTGCCTTTGCTATGAATCTCTACTACCAGAAGGTTGGAAGAAATCCATGGAACTGTGATTTCTCTCAAACAGCAATGCTTACATCTCAAAATCCAAGTTACAGTGCTTGTGTTTATCCTGGTGAAAGTACCTGA 1380 0.5072 MASHSFLLQLSLIITALHTAVSQPFIGVNYGQVADDLPAPEVSAELLKSTTVGKVRLYGADPAIIKALANSGIGIVIGVANGDIPSLASDPDSATQWVNANVLPHYPESNITLIAVGNEIIKSGDDGLASQLLPAMQNVQNALNSASLGGKIKVSTVHSMAVLTQSEPPSAGSFDPALMDILQPLVAFLKNNESPFAINPYPFFAYQSDPRPETLAFCLFQPNSGRVDQGNGNVYSNMLDAQVDAVQSGLSSMGMEDMEIVIAETGWPSRGDTNEVGATLENARAYNGNLIAHLRSMVGTPSMPGKSVDTFIFALYDEDLKPGPASERAFGLFKTDLTMSYDVGLDNSASSHKNPPTGPVTPAPKRETEWCIPKVEVSEAQLQTNVDYICGSQVIDCGPIQPGGACYEPNTVLSHAAFAMNLYYQKVGRNPWNCDFSQTAMLTSQNPSYSACVYPGEST* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0470 459 Gene3D - 365 455 - -
Pvu11g0470 459 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
Pvu11g0470 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 451 IPR044965 GO:0004553|GO:0005975
Pvu11g0470 459 Gene3D Glycosidases 25 353 - -
Pvu11g0470 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 6 451 - -
Pvu11g0470 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Pvu11g0470 459 Pfam X8 domain 370 441 IPR012946 -
Pvu11g0470 459 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Pvu11g0470 459 SMART X8_cls 369 454 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0470 Pvu-Chr11 3930693 3934679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0470 22 455 Miscellaneous Gene Families AT2G16230 64.450 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0470 - - gmx:100810568 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0470 11 3930693 3934679 Pvu11g0470 11 3930693 3934679 ECH