Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0464 ATGGAATGTGGTGTGCGGCGAAGCAGGAGTGTGAGAATGGCGGAAGAAGCAATTCTGGGATACCTAGAGAAGAACGAGGAGATTACAGACTCGGGTGAGTTCGCAGCTGAACGCGGCATTGACCATAACGACGTCGTGAACGTGATTAAGAGCCTGCACGGTTTCAGATACGTGGATGCGCAAGACATTAAGAGAGAGACATGGGTGCTCACTAATGAGGGTAAAACCTATTCCACTGTGGGATCACCGGAAGTTCAACTCTTTCTGGCCATTCCGCCTGAGGGTATCTCCAAAGAAGACCTTCAGAAAAAGCTGGATCCTTCACTCTTCAAGATAGCTTGTGCCCAGGCTGCAAAGAACAAATGGGTGGATATGGGAAAACAATTGATTTCTAGAAAGGTTCAACATGTGGATGACAAGGTCAAAGATCTTCTTATTCAAATACAACAAGGGCGGAACATTGGTTCAGATGAGATCAAAGCACTCAAAGCAAGAAAACTCATTGTCCCACAGACGTGGAAGGGTTACTCCTTGAAAAAAGGTCCAAATTATGCGCCCAAAAGAAAGCAGGTTGTCACTGACCTCACTCGTGAAAATTTTCAGAGTGGTGAGTGGAAGGATCTAGAGTTCAAGGAGTACAATTATACTGCTAAAGGTCAGCCTCTTGAGGGTGGCAATCTTCATCCATTGCTGAAGGTACGATCTCAGCTGAAACAGATTTTCCTCTGCATGGGGTTTGAGGAGATGCCAACAAATAATTTTGTTGAGAGCAGCTTCTGGAACTTTGATGCCCTGTTCCAGCCCCAACAACACCCAGCTCGTGATTCACATGATACATTCTTTTTGGAAACTCCTTCAACAACAAAGGAATTGCCAGAAGATTATGTTGCAAGAGTGAAGCAAGTTCATGAATCTGGTGGTTATGAGTCTAGAGGATATGCATATGACTGGAAGAGAGAGGAAGCAAATAAAAACCTCCTGCGAACCCATACAACTGCTGTTTCCTCCAGGATGCTTTACCAACTTGCAAAGAAACCATTTGCCCCGAAAAAATATTTCTCTATAGATCGTGTATTCAGAAATGAAGCAGTTGATCGGACACATCTTGCGGAGTTCCACCAAATAGAAGGCCTTGTATGTGATCGGGGTCTCACTCTGTCTGACTTGATAGGAGTCCTGCATGATTTTTTCTCACGCTTAGGCATGACCAAGCTGAAGTTCAAACCAGCTTACAATCCATACACTGAACCTAGCATGGAGATCTTTAGTTATCATGAAGGTTTTAAAAAATGGGTAGAGGTAGGAAACTCGGGCATGTTCAGGCCTGAAATGTTGCAGCCGATGGGACTTCCTGAAGATGTTCAAGTTATTGCGTGGGGGCTTTCCCTTGAAAGGCCAACAATGATTCTTTACGGTATAGATAACATCAGAGATCTCTTCGGACACAAGGTGGATCTTGGGCTCATAAAGAAAAATCCTATATGTCGTCTTGGTATTGACTAA 1503 0.4418 MECGVRRSRSVRMAEEAILGYLEKNEEITDSGEFAAERGIDHNDVVNVIKSLHGFRYVDAQDIKRETWVLTNEGKTYSTVGSPEVQLFLAIPPEGISKEDLQKKLDPSLFKIACAQAAKNKWVDMGKQLISRKVQHVDDKVKDLLIQIQQGRNIGSDEIKALKARKLIVPQTWKGYSLKKGPNYAPKRKQVVTDLTRENFQSGEWKDLEFKEYNYTAKGQPLEGGNLHPLLKVRSQLKQIFLCMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLETPSTTKELPEDYVARVKQVHESGGYESRGYAYDWKREEANKNLLRTHTTAVSSRMLYQLAKKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLSDLIGVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKNPICRLGID* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0464 500 Gene3D Bira Bifunctional Protein; Domain 2 228 499 IPR045864 -
Pvu11g0464 500 SUPERFAMILY Class II aaRS and biotin synthetases 213 485 IPR045864 -
Pvu11g0464 500 Gene3D - 83 137 - -
Pvu11g0464 500 Gene3D - 70 168 - -
Pvu11g0464 500 PANTHER PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT 15 498 - -
Pvu11g0464 500 PANTHER PHENYLALANYL-TRNA SYNTHETASE 15 498 - -
Pvu11g0464 500 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 232 493 IPR006195 -
Pvu11g0464 500 Pfam PheRS DNA binding domain 1 15 68 IPR040724 -
Pvu11g0464 500 CDD PheRS_alpha_core 228 485 - -
Pvu11g0464 500 TIGRFAM pheS: phenylalanine--tRNA ligase, alpha subunit 183 491 IPR004529 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Pvu11g0464 500 Pfam PheRS DNA binding domain 3 82 137 IPR040725 -
Pvu11g0464 500 Pfam tRNA synthetases class II core domain (F) 213 486 IPR002319 GO:0000049|GO:0004812|GO:0005524|GO:0043039
Pvu11g0464 500 Gene3D - 19 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0464 K01889 - gmx:100777795 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0464 11 3892629 3898089 Pvu11g0464 11 3892629 3898089 ECH