Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0443 ATGACGACTCCCAAATTTCAAAACGTAGTCTCCACGGCGGCGTCCGTGGCGGCCACCGTGATGCTCCTCCGCTCGTTCACCCGCAACTACATTCCCCCGGAGCTCCAGCACTACCTCTACTCCAAACTCTCCAAACTCCTCTCCTTCTCCTCCGAACTCACCCTCGTCATCGACCAGTTCCACGAGTTCGCTCCGAACCCGCTCTTCGCCGCGGCGCAGCTCTACCTCAAGCCGCACGAGGCGCCGAACGCGAAACGCTTCCGCGCCACGATGCCTTCGAGATCGCGCCACGTGTCCCTCCTGCTGGACGGCAACGACGAGATCACGGACTCCTTCAACGGCGTGCCGTTCCGGTGGAAGCTCGTGGCCGGACGCCACAAATCGAATTCCGAGGTGCGGTTCTTCGAGGTGCGGTTCCACAAGAAGCACCGGGAGATGGTTCTGTCGGAGTATTTGCCGCGCGTGATGGAGGAGGCCAAGGCGGCGCGCGAGCGGAGGAAGACGCTGAGGCTCTTCACGGTGAAGGACAAGCGGATGCGGATGGGAGGGAGGGGGGATTTGTGGCAGGGCGTGAATCTCGAGCACCCTGCGACGTTGGCGACAGTGGCTATGGATTGGGAATTGAAGGAGATGATAATTAGGGATTTGGATAGGTTTGTGGAGAGGAAGGGTTTCTATAAGAGTGTTGGGAAGGCGTGGAAGAGAGGGTACTTGCTTTCGGGTCCCCCTGGTACTGGGAAATCGAGTTTGATTGCTGCCATGGCCAATTATCTGAATTTTGATGTCTATGATTTGGAACTCACCTCTGTTAGGCGAAATTCTGATCTCAGGAAGTTGCTGATGGCCACCAGGAACCGTTCCATACTTGTTGTGGAAGACATTGATTGTTCCCTTCAATTGCAGGACAGGATTGCAAAACCTACATCATCACAACCCCATTCTCACTCATTTCACAATCCACCACCACCCCAGGTCACGTTATCGGGGTTCCTGAGTTTCATGGATGGGTTGTGGTCAAGTTGTGGGGATGAGAGGATCATGGTGTTCACCACGAATCACAAGGAGAAATTGGACCCTGCTCTCTTGCGCCCTGGGCGCATGGATGTGCACATTGACATGACCTACTGCACCCCTGGTGGGTTCAAAATGCTGGCTTCCAATTACCTTGGGATCACAGAGCACCCACTTTTTGTTCAAATTGAGAAGTTTCTTGGGACCATCAATGTCACTCCTGCAGAGGTGGGGGAGCAGTTTTTGCTGGATCAAGACCCGGAAATCGCACTCAACAGCCTCATAGATCTCCTTCTTCAGAAGAAACGAAATCATGAATTGAAGATGAAAGCACCTCTCACCATTGAATGA 1362 0.5396 MTTPKFQNVVSTAASVAATVMLLRSFTRNYIPPELQHYLYSKLSKLLSFSSELTLVIDQFHEFAPNPLFAAAQLYLKPHEAPNAKRFRATMPSRSRHVSLLLDGNDEITDSFNGVPFRWKLVAGRHKSNSEVRFFEVRFHKKHREMVLSEYLPRVMEEAKAARERRKTLRLFTVKDKRMRMGGRGDLWQGVNLEHPATLATVAMDWELKEMIIRDLDRFVERKGFYKSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTSVRRNSDLRKLLMATRNRSILVVEDIDCSLQLQDRIAKPTSSQPHSHSFHNPPPPQVTLSGFLSFMDGLWSSCGDERIMVFTTNHKEKLDPALLRPGRMDVHIDMTYCTPGGFKMLASNYLGITEHPLFVQIEKFLGTINVTPAEVGEQFLLDQDPEIALNSLIDLLLQKKRNHELKMKAPLTIE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0443 453 SMART AAA_5 233 377 IPR003593 -
Pvu11g0443 453 ProSitePatterns AAA-protein family signature. 345 363 IPR003960 GO:0005524|GO:0016887
Pvu11g0443 453 CDD AAA 234 375 - -
Pvu11g0443 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 415 IPR027417 -
Pvu11g0443 453 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 3 443 - -
Pvu11g0443 453 PANTHER BCS1 AAA-TYPE ATPASE 3 443 - -
Pvu11g0443 453 Gene3D - 189 371 IPR027417 -
Pvu11g0443 453 Pfam ATPase family associated with various cellular activities (AAA) 238 373 IPR003959 GO:0005524|GO:0016887
Pvu11g0443 453 Gene3D - 372 441 - -
Pvu11g0443 453 Pfam Domain associated at C-terminal with AAA 31 122 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0443 Pvu-Chr11 3753319 3755047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0443 226 366 Miscellaneous Gene Families AT3G02450 32.215 2.61e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0443 K08900 - gmx:100789716 640.573