Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0416 ATGGTTTCTCTCAATCCTGAAGCACCCGAATTTTTCCCTTCTCGCACCTTCAAGCTTCACCAACAAGAACAACCCTTTCCATGCCCCAATTTCCCCACTTCCACGTTCACTCCTCACTCCCACTACCACTACTACGTCGTTTCTTCATTCCCCTCCAGAGAACTTCACCCTTATTTTTACTACCCCACCACAACACTTCCACCACTTTCCCTTCCCTCTCACAATGCCACCGCAACCACCCCTTTGGAACCACAAGCTCAACCACCCTGTTTTCATGGAACACAAAAGTACTCTTCTCCGGTGAATGCCCATGCAGTGAACCCAAAGAACGATGAACTGGTTGTAGCAGAAGCCGTGACGTGTGGCGCAAAAGGGCTTGTGCAGAAGCAAGTGTTCAAGGCTTTCATAAGCTGCGGAACAGTGAGAGGGCACCGTTCTGACGGCTCGAGAATGAAGGCTTACGCGCGGAGAAAGAAGGGAGAAGAAAACGGTCAACGAAAAAGTTTTGACTTTTTGAGGAACGGAAAGGTTACGAGGAACCCAGATGAACAGTGTTTCAAGGGCTTTCCGAAGAAGAAACGCTGTTATCCTCTGTTGCCTGTTAGAGTGGACAGGAATGAAACCACTGTCATGATCAGAAACATTCCTAGCAAATACACCCGAGATATGCTGGTGGAGTTTCTGGACAATCACTGCATGAAAGTGAATCTAAGAGACAAAGAGAGAGGCGAAGAGTCCAGTTCTCTGGCTTTTGATTTTGTTTATTTGCCTATTGATTTCAAAACTGGGATGAACAAGGGTTACGCTTTTGTGAACTTCACCAAACCCCAGGCAGCGTGGAAGTTTCTTTTGACAGCCTCCAATATGAAATGGGACTTGTTCCAGTCCCACAAGATACGTGAAGTGGTTTCTGCACGTTTGCAGGGGATAGAGAAATTGGAGAAGCACTTCGAAACAATGAACTTTCCGTACGAGTCCGAGGAAGTTCTGCCAGTGTGCTTTAACCCACCTCGCGATGGTGTAACGAAGGGAAAGCAACGAACTTGTGGAAAACTTTTGGAAGCGTGA 1068 0.4719 MVSLNPEAPEFFPSRTFKLHQQEQPFPCPNFPTSTFTPHSHYHYYVVSSFPSRELHPYFYYPTTTLPPLSLPSHNATATTPLEPQAQPPCFHGTQKYSSPVNAHAVNPKNDELVVAEAVTCGAKGLVQKQVFKAFISCGTVRGHRSDGSRMKAYARRKKGEENGQRKSFDFLRNGKVTRNPDEQCFKGFPKKKRCYPLLPVRVDRNETTVMIRNIPSKYTRDMLVEFLDNHCMKVNLRDKERGEESSSLAFDFVYLPIDFKTGMNKGYAFVNFTKPQAAWKFLLTASNMKWDLFQSHKIREVVSARLQGIEKLEKHFETMNFPYESEEVLPVCFNPPRDGVTKGKQRTCGKLLEA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0416 355 SUPERFAMILY RNA-binding domain, RBD 202 291 IPR035979 GO:0003676
Pvu11g0416 355 Gene3D - 131 305 IPR012677 -
Pvu11g0416 355 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 208 306 IPR000504 GO:0003723
Pvu11g0416 355 PANTHER RNA BINDING PROTEIN 102 347 - -
Pvu11g0416 355 Pfam RNA recognition motif 2 208 317 IPR007201 -
Pvu11g0416 355 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 2 102 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0416 Pvu-Chr11 3491322 3492955 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0416 - - vun:114170421 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0416 11 3491322 3492955 Pvu11g0416 11 3491322 3492955 ECH