Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0414 ATGGCATTCAAACTTCAACAACTACCTCTTTCTTCCTCTCTTCACTCCTCTCCCCGCCAAAACCCTAATTTCGCACTTTCAAACCTTCGTCTCCCTCGTCTCTTCTCTGCACCTTCTCTTCCTCTCACTCTCCGTCTCTCAACCACAGCTTCAGCATCCTCGTTTCATCGCACTGCATTCGTAACTGCTCGCGCATTTCGAAGCGATGAACTCGCTGACGAAGGCGAAGGCGAAGAAGAAGAAGAAGTATCGAGGCAGGGTGAGAAAAAGGAACTGGCAAATAAAGGCATATTGGATCAGATAAAGGAAATTGTGATGTTTACAGGTCCGGCAACCGGACTTTGGATATGTGCACCGCTTATGAGTCTCATTGATACTGCAGTTATTGGTCAGAGAAGCTCCATTGAGCTTGCTGCTCTAGGTCCTGCTACTGTCGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAACAAGAAGTACAACATCACATATCTATCTTGTCTTTTGTTGGGTTATCTTGTGGCGTTGTGATGCTTTTGTTCACTAGGCTATTTGGTGCTGCAATAATAACTGCTTTCACTGGGTCAAAGAATGCACACATAGTACCTGCAGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCATGGCCTGCTTTACTTGTTGGATGGGTTTCTCAAAGTGCAAGTCTTGGCATGAAAGATTCCTTGGGACCCTTGAAGTCTTTGGCTGCTGCTACTGTTATAAATGTTATTGGTTGCATAGTTTTGTGCACCTGGTTAGGCTATGGAATTGTAGGGGCAGCGTGGGCTACAATGGTTTCACAAGCTGCTGCTGCTTACATGATGATTCAAACTCTAAACAAAAAGGGATATAATTCACTTGCCTTCTCCATTCCATCAGCGAAGGAACTTCAGATGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTCGCTACATCATTGGGTACTCATACAATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACTGTTTGGGGTGAACCTCTCTCCCAAACTTCTCAGTCATTTATGCCCGAATTGTTATATGGAGTAAATCGCAGTTTGTCAAAGGCCCAATTGCTTCTAAGGTCTCTTCTGACAATCGGAGTCATACTTGGAATATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCATACATTTTTACACCTGATCGGATGGTTATTCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCGCTGTCTATAACTCCCCCTACTCACAGCCTCGAGGGAACATTGCTGGCTGGGCGGGACCTGAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGCGCGGGTTCAGTATTATTATGGGCCATGAGTAGTAGATTTGGTTTACTTGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGCTTTTCAATCGCCCTCCAGCGCATTCTTTCTCCCAAGGGTGTTTTGTACTCAGGAAACACAGATCAGCATAAGCTGCGAAAGCTAAGGACTACTTAA 1635 0.441 MAFKLQQLPLSSSLHSSPRQNPNFALSNLRLPRLFSAPSLPLTLRLSTTASASSFHRTAFVTARAFRSDELADEGEGEEEEEVSRQGEKKELANKGILDQIKEIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILSFVGLSCGVVMLLFTRLFGAAIITAFTGSKNAHIVPAASSYVKIRGLAWPALLVGWVSQSASLGMKDSLGPLKSLAAATVINVIGCIVLCTWLGYGIVGAAWATMVSQAAAAYMMIQTLNKKGYNSLAFSIPSAKELQMIFGLAAPVFMTMMSKVAFYSLLIYFATSLGTHTMAAHQVMVQTYSMCTVWGEPLSQTSQSFMPELLYGVNRSLSKAQLLLRSLLTIGVILGILLGIVGTSVPWLFPYIFTPDRMVIQEMHKVLIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTGCFCAGSVLLWAMSSRFGLLGCWFSLAIFQWARFSIALQRILSPKGVLYSGNTDQHKLRKLRTT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0414 544 CDD MATE_DinF_like 102 523 IPR044644 -
Pvu11g0414 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 44 534 IPR044644 -
Pvu11g0414 544 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g0414 544 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 44 534 - -
Pvu11g0414 544 TIGRFAM matE: MATE efflux family protein 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu11g0414 544 Pfam MatE 116 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0414 Pvu-Chr11 3480559 3487600 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0414 K03327 - gmx:100778835 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0414 11 3480559 3487600 Pvu11g0414 11 3480559 3487600 ECH