Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0413 ATGGCATTCAAACTCAAATCACTACCTCTTCCTTACTCTCTCTACTCCTCTCCCCGCCAAAACCCTAATTTCATGCTTTCAAACCATCGTCTTCCTCGTCGTTTCGCTGCACATTCTCTTCCTCTCAGTCTCTGTCTCTCAAGCACAGCTTCTGCATCCACGTTTCATCGCACTGCCTTCGTTACCGCACGCGCATTTCAAAGTGATGAACTCATTAACGAAGGCGAAGAAGACAGAGATGAAGAAATGCCGAGACAGGGTGAGAAAAAGGAACTAGCGAATCAAGGGATATGGAGGCAGATGAAGGACATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTCTCAATCGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAAGAAGAAGTACAACACCACATATCTGTTTTGCTTTTTGTTGGGCTATCTTGTGGCATTGCGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCATTGGACCAAAGAATGCACACATAGTACCAGCAGCTAGCAGTTATGTAAAGATTCGAGGCTTGGCATCACCTGCCTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAAGCTTTGGCTGCTGCTAGTTTTATAAATATAAGTGGTTGTATAATTTTGTGCATCTGTTTAGGCTATGGTATTGTAGGGGCAGCATGGGCTACAATGGTTTCACAAGTTGTTGCTGCTTGCATGATGATTCACACTCTAAACAAAAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGCAGGAAGTTTTGACGATATTTGGTCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTACTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACCGCTCAATCATTTATGCCTGAACTGATATATGGAGCAAATCGGAGTTTGTCCAAGGTTATTATACTTGGCTTATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCCTACATTTTTACACCTGATCGGATGATCACCCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCCCTTGCTGTAACACCCCCTACTATCAGCCTTGAGGGAACATTGCTGGCTGGGCGGGATCTGAGATATATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCACTAGTATTATGGGCCTTGAGTAGTAGATTTGGTTTGCTAGGTTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGGTTTTCGATGGCCCTCCTGCGCCTTCTTTCTCCCAAGGGCATTTTATACTCGGAAGATACAGGCCAGTATGAGCTGCTAAAGCTAAAGACTGCTTAG 1602 0.4395 MAFKLKSLPLPYSLYSSPRQNPNFMLSNHRLPRRFAAHSLPLSLCLSSTASASTFHRTAFVTARAFQSDELINEGEEDRDEEMPRQGEKKELANQGIWRQMKDIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGIAMLLFTRLFGAAIITAFIGPKNAHIVPAASSYVKIRGLASPALLVGWVAQSASLGMKDSWGPLKALAAASFINISGCIILCICLGYGIVGAAWATMVSQVVAACMMIHTLNKKGYNALAFSIPSGQEVLTIFGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGANRSLSKVIILGLLLGIVGTSVPWLFPYIFTPDRMITQEMHKVLIPYFIALAVTPPTISLEGTLLAGRDLRYISLSMTGCFCVGSLVLWALSSRFGLLGCWFSLAIFQWARFSMALLRLLSPKGILYSEDTGQYELLKLKTA* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0413 533 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 47 522 - -
Pvu11g0413 533 MobiDBLite consensus disorder prediction 71 92 - -
Pvu11g0413 533 Pfam MatE 116 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu11g0413 533 TIGRFAM matE: MATE efflux family protein 110 492 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu11g0413 533 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 47 522 IPR044644 -
Pvu11g0413 533 CDD MATE_DinF_like 100 512 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0413 Pvu-Chr11 3470930 3478700 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0413 K03327 - gmx:100778295 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0413 11 3470930 3478700 Pvu11g0413 11 3470930 3478700 ECH