Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0408 ATGGGAGAAGAAGGTATTTGGAAAGGTGTTACAAAGAAAGGGGTCAACCCTGGGAAGGCTACCATATTAGCTCTTGGCAAGGCTTTCCCTCCACAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGGAGCACAAACTGTGACAATCCTGAGCTTAAGCAGAAGCTCACTAGACTTTGCAAAACAACCACAGTGAAAACAAGGTACGTGGTTATGTCAGAGGAAATACTGATAAAGTATCCAGAGCTTGTGACTGAAGGCACCCCCACAGTGAAGCAGAGGCTAGAGATATGCAACGAGGCAGTGACAGAAATGGCCATTGAGGCTGCACTAGGTTGCATTAAGAACTGGGGTGGATCATTATCAGACATAACACATTTGGTTTATGTGTCATCTAGTGAAGCAAGACTACCTGGTGGTGATCTTTACCTAGCGAAAGGACTAGGACTGAGCCCTGATACCCAACGAATCATGCTCTATTTCGCTGGTTGTTCAGGAGGTGTGGCTGGCCTACGTGTTGCAAAGGACATAGCTGAGAACAACCCTGGAAGTCGGGTGTTGCTTGCTACCTCAGAAACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCCTATGATCTTGTCGGGGTGGCACTCTTTGGGGATGGTGCTGGTGCCATGATAATTGGGTCAGACCCAATATTGGAGTATGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTTTGCCACACACTGAGAAGAAAATTGATGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAAGGGAACTTCCTCAGATAATTGAAGACAATGTTGAAGGATTCTGTGAGAAATTAATGAGTGTTGTTGGGTTCCAGAATAAGGAGTACAACAAGGTGTTTTGGGCTGTGCATCCAGGGGGGCCTGCCATCTTGAATCGCATTGAGAAGAGACTTGATTTGTTACCCGAGAAGCTAAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAATGCTAGCAGCAACACCATTGTGTATGTGCTGGAGTATATGATAGAGGAGGCTCTCAAGACTAGAAAAGATGGTAGAGGAGATTCTGAATGGGGCTTGATACTTGCATTTGGACCCGGAATTACATTTGAGGGAATTCTTGCAAGGAACTTGTGTGCTTGA 1179 0.4572 MGEEGIWKGVTKKGVNPGKATILALGKAFPPQLVMQEYLVDGYFRSTNCDNPELKQKLTRLCKTTTVKTRYVVMSEEILIKYPELVTEGTPTVKQRLEICNEAVTEMAIEAALGCIKNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILEYEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCEKLMSVVGFQNKEYNKVFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEALKTRKDGRGDSEWGLILAFGPGITFEGILARNLCA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0408 392 SUPERFAMILY Thiolase-like 237 388 IPR016039 GO:0016746
Pvu11g0408 392 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 390 IPR011141 GO:0009058|GO:0016747
Pvu11g0408 392 SUPERFAMILY Thiolase-like 17 230 IPR016039 GO:0016746
Pvu11g0408 392 Pfam Chalcone and stilbene synthases, N-terminal domain 11 230 IPR001099 -
Pvu11g0408 392 Gene3D - 6 237 IPR016039 GO:0016746
Pvu11g0408 392 Gene3D - 238 389 IPR016039 GO:0016746
Pvu11g0408 392 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 390 - -
Pvu11g0408 392 CDD CHS_like 20 386 - -
Pvu11g0408 392 PIRSF PKS_III 8 391 IPR011141 GO:0009058|GO:0016747
Pvu11g0408 392 Pfam Chalcone and stilbene synthases, C-terminal domain 240 390 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0408 Pvu-Chr11 3437635 3440664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0408 86 377 Miscellaneous Gene Families AT4G34250 25.697 7.93e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0408 - - vun:114168705 750.74