Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0402 ATGGCCTCTGCATCACCCTCTCTGCTCAAGTCTTCACTTGTTCTTGACAAGTCTGAGTGGGTGAAGGGTCAAACCCTTCGCCAACCTTCTGCATCAGTTGTCAGATGCAGCCCCACCAACCCTTCAGCCCTCACCATCAGAGCTGGTTCCTATGCTGATGAGCTTGTTAAGACTGCGAAAATCGTTGCTTCACCAGGGAGGGGTATTTTGGCTATGGATGAGTCCAATGCTACCTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAATACTGAAGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGTTCCAGGCCTTGGTCAATACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACCATTGATGGCAAGAAGATTGTCGATGTGCTCCAAGAGCAAAAAATTGTTCCTGGTATTAAGGTCGACAAGGGTTTGGTTCCCCTTGCTGGATCCAACGATGAGTCATGGTGCCAAGGTTTGGATGGTCTTGCCTCTCGCTCAGCTGCATACTATCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCACTGCTCTGGCTGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCAATTTCTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGGAACATACTATTGATAGAACTTTTGAAGTGGCCCAAAAGGTGTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTCCTGAAGCCTAGCATGGTTACACCTGGAGCTCAGTCCAAGGAGAAGGTCAGTCCTGAAACAGTTGCTGATTACACCCTAAAGCTCCTTCACAGGAGAATCCCCCCTGCTGTTCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAAGCTACCTTAAATTTGAATGCCATGAACCAGTCTCCAAACCCCTGGCATGTGTCATTTTCATATGCCAGAGCCCTCCAAAACACTGCCTTGAAGACATGGGGAGGACTCCCAGAGCAAGTGAAAGCATCACAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTGGCTCAGCTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAGTTGTTCGTCAAAGGTTACTCCTACTAA 1197 0.4921 MASASPSLLKSSLVLDKSEWVKGQTLRQPSASVVRCSPTNPSALTIRAGSYADELVKTAKIVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGQYISGAILFEETLYQSTIDGKKIVDVLQEQKIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPTALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHTIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAQSKEKVSPETVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGLPEQVKASQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0402 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Pvu11g0402 398 Gene3D Aldolase class I 34 397 IPR013785 -
Pvu11g0402 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 IPR000741 GO:0004332|GO:0006096
Pvu11g0402 398 SUPERFAMILY Aldolase 44 398 - -
Pvu11g0402 398 CDD FBP_aldolase_I_a 52 378 - -
Pvu11g0402 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 27 398 - -
Pvu11g0402 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0402 Pvu-Chr11 3385903 3388808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0402 51 398 Miscellaneous Gene Families AT3G52930 55.966 9.00e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0402 K01623 - gmx:100775844 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0402 11 3385903 3388808 Pvu11g0402 11 3385903 3388808 ECH
Pvu9g0032 9 582544 583548 Pvu11g0402 11 3385903 3388808 ECH