Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0399 ATGGGAGCTATCGCTGGAGAAGAGCTGCTGAAATGGGAGAAGATGCAAGGAGTGAGTGGCCGCGAAGAGAAGATTCTTGTGTCAATAAGGCTGAGGCCTCTGAATGAGAAGGAGATTGCCGCTAATGAATCAGCAGACTGGGAATGCATTAATGATACTACCATCTTGTATCGGAACACACTGCGTGAGGGATCCACATTTCCAAGTGCCTACACATTTGACAAAGTATTTCGGGGTGATTGTGCCACAAGGCAGGTATATGAGGAAGGAGCCAAAGAAGTTGCTCTTTCAGTTGTTGGTGGAATTAACTCAAGTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATATACGATGGTTGGAATAACCGAATACGCTGTTGCTGATATTTTTGACTATATAAAGAGGCATGAAGAAAGAGCATTTATATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTCGAGACCTCCTCAGTACTGACAACAGTCCACTTAGGCTACGTGATGATCCAGAGAGAGGACCCATTTTAGAGAAACTCACAGAGGAGACACTACGAGACTGGGGGCATTTAAAAGAGCTTATAGCCTTCAGTGAAGCTCAGAGACAGGTGGGAGAGACATACCTAAATGAAAAGAGTTCTAGATCTCACCAAATTATCAGATTGACAATGGAAAGTTCTGCCAGGGAATTCCTAGGCAAAGGCAACTCGGCCACCCTAGTAGCTGGTGTGAATTTTGTTGATTTGGCGGGGAGTGAGCGTGCATCTCAGGCATCATCAGCTGGGATGAGACTAAAAGAAGGGTGCCATATAAACCGGAGTTTACTTACTCTTGGAACAGTTATTCGCAAGCTTAGTAATGGGAGACATGGACACATCAATTACAGAGATTCCAAGTTGACACGTATACTTCAGCCTTGCTTGGGTGGAAATGCTAGGACGGCTATCATTTGCACTTTGAGCCCTGCACGAAGTCATGTTGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTTGTGATGTCTGATAAGGCCTTGGTCAAGCATTTGCAGAAAGAGGTGGCTAGATTAGAGAGTGAGTTGAAAACTCCTGGTGCTCCTGTTACCTCCAATTGTGATTATGCAACATTGTTGAGAAAGAAAGATCTCCAAATAGAGAAGATGGAGAAGGAGATTAGGGAGCTAACTAAGCAACGTGACCTTGCTCAATCAAGGGTTGAAGATTTGCTGCGCATGGTCGGAAAGGAGCAGATATCTGGAAAAGAAGGGGAAGATATATGGGAAGATGATTGTTCAGTATCAGAGTCATCGAGCATTTGTGGTCCTCATCATCCTAATACACACAGAGAGTTCAACAACCCTCATTATATTGATGGAGATAGTGGAAGTAATCCTGAAGACACTGAAGATTACTGCAAGGAAGTTCGATGTGTTGACATTGGAGAGTTAACTTCACCAATATCTGGAGTGGAAAGTGGAACAGGCCAGGAAATATCTTCACATTTGAGTGAAGATACTGGCGACAGCCAGATCCAAGAAAATTCAACACTGCTGGAGCGGAGACTGCATGATGTACAGTCAACCATTGATTCTCTTATATGTCCTTCTCCTGATGAACAATCTCCGCTGGTCATGTCAGAAAATGTGTCAAATTATAGGAATCGTAAATTAACAAGAAGCTGGAGTTGTACGGAATATCACATGACTGGTTCTCCGGAGTCAGTGGGAGTAATACAGAGGACTCCAGCCAATGGATATGATAAAGGATTCCCTGGTAGGCCAGATGGTTTGCGGAGAAAGTTTCCTCAGTTGAATTATGATGGTTCCATAAAATTGTTAAGGAATGGTTCTCAGTCTTCCATGGGAAGTCTTTCTGTGGATGATCTTAGAGCGAGCAGCATTAGAACATCTGCTGATGAGGATATTGCTAGCATCCAGACTTTTGTTACTGGGATGAAAGAAATGGTCAAACAAGAATATGAAAAACAGCTTTTTGATGGTCAGGACCATGAGGCAGGAAGAAAGAGGAACGTGAAAGACGCAGGTGTGGATCCAATGTTGGAGACATCTGGAACTCCTTTAGACTGGTCTCTGCAATTCAGTAGACAGCAAAAAGAGATAATTGAACTGTGGCAATCATGCTGTGTACCATTGACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCAACAGATTCCATTTACATGGAGGTAGAACTTAGAAGACTATCCTTCCTGAAAGAAACATTTTCTGATGGAAACCAGTCTGTGAGAGATAGTCAGACAATCACACTAGCTTCAAGCGTGAAAGCACTTCGGCGAGAAAGAGGAATGCTTGTGAAGCTTATGCACAGGAGGCTTTCCGATAAGGAGAGAATAAGGCTGTACGAGGAGTGGGGCATTTCATTGGATTCAAAGCGCAGGAGACTGCAACTAGTGAACCGTTTGTGGAGCGAAAATGATACGAACCACGTAATGCAAAGTGCTACGATAGTTGCCAAGTTAGTGAGGTTTTGGGAGAGGGGCAAGGCCCTCAAGGAGATGTTTGGGCTTAGCTTCACACCCCAAATCACAGGGCGGAGATCATCTTATTCATGGAAAAATAGCTCAGCATCACTTTTATAG 2676 0.4342 MGAIAGEELLKWEKMQGVSGREEKILVSIRLRPLNEKEIAANESADWECINDTTILYRNTLREGSTFPSAYTFDKVFRGDCATRQVYEEGAKEVALSVVGGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIKRHEERAFILKFSAIEIYNEIVRDLLSTDNSPLRLRDDPERGPILEKLTEETLRDWGHLKELIAFSEAQRQVGETYLNEKSSRSHQIIRLTMESSAREFLGKGNSATLVAGVNFVDLAGSERASQASSAGMRLKEGCHINRSLLTLGTVIRKLSNGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKEVARLESELKTPGAPVTSNCDYATLLRKKDLQIEKMEKEIRELTKQRDLAQSRVEDLLRMVGKEQISGKEGEDIWEDDCSVSESSSICGPHHPNTHREFNNPHYIDGDSGSNPEDTEDYCKEVRCVDIGELTSPISGVESGTGQEISSHLSEDTGDSQIQENSTLLERRLHDVQSTIDSLICPSPDEQSPLVMSENVSNYRNRKLTRSWSCTEYHMTGSPESVGVIQRTPANGYDKGFPGRPDGLRRKFPQLNYDGSIKLLRNGSQSSMGSLSVDDLRASSIRTSADEDIASIQTFVTGMKEMVKQEYEKQLFDGQDHEAGRKRNVKDAGVDPMLETSGTPLDWSLQFSRQQKEIIELWQSCCVPLTHRTYFFLLFRGDPTDSIYMEVELRRLSFLKETFSDGNQSVRDSQTITLASSVKALRRERGMLVKLMHRRLSDKERIRLYEEWGISLDSKRRRLQLVNRLWSENDTNHVMQSATIVAKLVRFWERGKALKEMFGLSFTPQITGRRSSYSWKNSSASLL* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0399 891 Gene3D Kinesin motor domain 17 377 IPR036961 -
Pvu11g0399 891 Pfam Domain of unknown function (DUF3490) 714 873 IPR021881 -
Pvu11g0399 891 MobiDBLite consensus disorder prediction 501 526 - -
Pvu11g0399 891 Coils Coil 393 427 - -
Pvu11g0399 891 Coils Coil 355 375 - -
Pvu11g0399 891 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 CDD KISc_CENP_E 24 346 - -
Pvu11g0399 891 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 MobiDBLite consensus disorder prediction 502 526 - -
Pvu11g0399 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 378 IPR027417 -
Pvu11g0399 891 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu11g0399 891 PANTHER CENTROMERE PROTEIN E 6 891 - -
Pvu11g0399 891 MobiDBLite consensus disorder prediction 458 483 - -
Pvu11g0399 891 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0399 Pvu-Chr11 3353547 3361655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0399 22 428 Miscellaneous Gene Families AT5G06670 39.713 4.30e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0399 K11498 - gmx:100820012 1594.33