Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0398 ATGGCTGTGGACGAAGCTGCATCTATGATAGATCCTAAAAACAAACCCAAACGAAACAAGTTTGCTTTAGCTTGTGCCATTTTAGCTTCCATGACTTCTATCTTACTAGGTTATGATATTGGAGTCATGAGTGGAGCAGCTTTGTACATACAACGAGATCTCAAAGTATCGGACGTCCAAATCGAAATCCTGAGTGGAATCATTAACCTCTACTCGCCGGTAGGCTCTTTTATCGCCGGCAGAACCTCCGACTGGATAGGTCGCCGTTACACCATTGCGCTCGCCGGCGTCATCTTCTTCGTCGGAGCAATCCTCATGGGATTCTCCCCTAACTACGCCTTTCTCATGTTTGGCCGCTTCTTCGCCGGCGTCGGCATCGGCTTCGCCTTCCTCATCGCCCCCATATTCCTGAACGGAGGGATTCTAATAGGATACATTTCAAACTACGGATTTTCGAAGCTGCCGCTTCGGCTGGGATGGCGGCTCATGCTTGGAGTGGGAGCCGTTCCGGCCATTTTTCTAGCGGTGGCAGTGTTGGCCATGCCGGAGTCACCGAGGTGGCTCGTGGCGCAAGGTCGATTAGGCGAAGCAAAGAGAATTCTGCACAAAATCTCGGACTCGGAGGAAGAGGCTCGGCTAAGGCTAGCCGACATAAAAGACACGGCTGGGATTCCTCAGGACTGCGACGACGACGTCGTATTAGTGACCAAGCGGAGTCACGGGCAAGGCGTATGGAAAGAGCTTTTCCTACACCCCAGTCGCGCCGTTTGCCACATCTTCATCGCGTCGCTCGGGATTCACTTCTTCGCCCAAGCTACGGGCATCGACGCCGTCGTTTTGTACAGCCCCAGGATCTTCCAGAACGCCGGAATCAAATCCGATAACTACCTTCTCCTCGCGACGGTGGCGGTTGGGTTCGTGAAAACCGCTTCCGTTTTGGTTGCCACGTTTTTGCTGGACCGGGCCGGGCGGCGCGTGTTGCTTTTATGCAGCGTTAGTGGGCTGATATTATCGCTTGTGACATTGGGTGTGTGTCTCACGGTGGTGGGCCATTCTGGGTCGACGCTGACGTGGGCCATTGGGCTGAGCATCGCTGCGGTGTTGGCCTATGCGTCGACTTTCTCGATTGGGTCGGGGCCCATCACGTGGGTGTATAGCTCGGAGATTTTCCCGCTTAGGTTGCGCGCTCAGGGCGTGGCGATTGGGGCGGTGGTGAATAGGGTGACGAGTGGGGTGATCTCAATGACTTTTCTGTCCCTCTGTAAGGCCATTACCACTGGGGGTGCCTTCTTTCTCTTTGCCGGTGTCGCTGTTGCTGCGTGGATTTTTCACTACACAATGCTCCCCGAAACACGTGGGAAGACTCTTGAGGAAATTGAAGGCTCTTTTGGTAATTTCTGGAGGAACCCTAAACCCAAAGGACTTCACTGCGCTAACGGCGACGCCCAATTAAGGAGCACTGCCCAAACTTCCACAGACGTGGATTAG 1488 0.539 MAVDEAASMIDPKNKPKRNKFALACAILASMTSILLGYDIGVMSGAALYIQRDLKVSDVQIEILSGIINLYSPVGSFIAGRTSDWIGRRYTIALAGVIFFVGAILMGFSPNYAFLMFGRFFAGVGIGFAFLIAPIFLNGGILIGYISNYGFSKLPLRLGWRLMLGVGAVPAIFLAVAVLAMPESPRWLVAQGRLGEAKRILHKISDSEEEARLRLADIKDTAGIPQDCDDDVVLVTKRSHGQGVWKELFLHPSRAVCHIFIASLGIHFFAQATGIDAVVLYSPRIFQNAGIKSDNYLLLATVAVGFVKTASVLVATFLLDRAGRRVLLLCSVSGLILSLVTLGVCLTVVGHSGSTLTWAIGLSIAAVLAYASTFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVISMTFLSLCKAITTGGAFFLFAGVAVAAWIFHYTMLPETRGKTLEEIEGSFGNFWRNPKPKGLHCANGDAQLRSTAQTSTDVD* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0398 495 ProSitePatterns Sugar transport proteins signature 1. 79 96 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu11g0398 495 Pfam Major Facilitator Superfamily 31 133 IPR011701 GO:0022857|GO:0055085
Pvu11g0398 495 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 136 IPR045262 GO:0015144
Pvu11g0398 495 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 135 480 IPR045262 GO:0015144
Pvu11g0398 495 Gene3D MFS general substrate transporter like domains 12 466 IPR036259 -
Pvu11g0398 495 PRINTS Sugar transporter signature 33 43 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0398 495 PRINTS Sugar transporter signature 116 135 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0398 495 PRINTS Sugar transporter signature 270 280 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0398 495 PRINTS Sugar transporter signature 364 385 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0398 495 PRINTS Sugar transporter signature 387 399 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu11g0398 495 Pfam Sugar (and other) transporter 136 461 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu11g0398 495 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 452 IPR020846 GO:0022857
Pvu11g0398 495 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 10 136 - -
Pvu11g0398 495 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 135 480 - -
Pvu11g0398 495 SUPERFAMILY MFS general substrate transporter 13 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0398 Pvu-Chr11 3343862 3345814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0398 3 489 Organic Solute Cotransporters AT3G18830 61.479 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0398 - - gmx:100816478 786.949