Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0391 ATGTCGCCGTCGACGACCGGGAACTGCAGCAAAATCCGGCGCATTGTGCGCGTGCGGCAAATGCTTCTCCGGTGGCGGAGGAAGGCGCGGCTGGCGACGTCGGACGTTCCGGCGGGCCACGTGGCGGTGTGCGTGGGGCCTAGCCGGAGGAGGTTCATCGTGCGCGCCACGTACCTGAACCATCCGATCTTCAAGATGCTTCTCGCGAAAGCAGAAGAAGAATACGGTTTCTGCAACCACGGTCCTCTCGCTCTTCCTTGCGACGAGTCTCTGTTCGAAGAGCTTCTCCGGGTCGTGGACCGACCCGTACCCGGATTGTACACGCTCGAGGATTTAAGGAGACGGTGCCACGTGGATGTGTCGAGCGGCAACTCTGAATCGTGGCCGTTGCTTCGTGATGAACTGATCTGCTGA 414 0.6063 MSPSTTGNCSKIRRIVRVRQMLLRWRRKARLATSDVPAGHVAVCVGPSRRRFIVRATYLNHPIFKMLLAKAEEEYGFCNHGPLALPCDESLFEELLRVVDRPVPGLYTLEDLRRRCHVDVSSGNSESWPLLRDELIC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0391 137 Pfam Auxin responsive protein 24 98 IPR003676 GO:0009733
Pvu11g0391 137 PANTHER SMALL AUXIN-UP RNA-RELATED 7 132 - -
Pvu11g0391 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0391 Pvu-Chr11 3300343 3300756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0391 7 131 Calmodulin-binding Proteins AT4G34750 54.286 9.52e-47 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0391 K14488 - gmx:100795345 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0391 11 3300343 3300756 Pvu11g0391 11 3300343 3300756 ECH