Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0390 ATGGCCATCAGAAAATCAAACAAGCTTCCACAACATGCAGTCTTGAAGCAGATCCTGAAGAGGTGTTCAAGCCTAGGAAAGAAAAACGGGTACGAGGATGATGGCCACCCTGGTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTGGGTGAAAACAGAAGTAGGTACATTGTGCCAATCTCATTCCTCGCTCACCCTGAGTTCCAATCCCTCCTTCGACAAGCTGAAGAAGAATTTGGCTTCGATCACGAGATGGGCCTCACCATTCCTTGCGAAGAAGTTGTCTTCAGGTCTCTAACATCATCGTTGAGATGA 315 0.4667 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYEDDGHPGDVPKGHFAVYVGENRSRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRSLTSSLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0390 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Pvu11g0390 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Pvu11g0390 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0390 Pvu-Chr11 3284652 3285401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0390 19 99 Calmodulin-binding Proteins AT3G43120 49.383 1.76e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0390 K14488 - gmx:100790342 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0390 11 3284652 3285401 Pvu11g0390 11 3284652 3285401 ECH
Pvu11g0390 11 3284652 3285401 Pvu2g1131 2 22331727 22332609 ECH