Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0389 ATGACCAACAGCTCATCTTCGAAAAAGCACGGTCAAGATCAGCCTGAATTAAGTGGTCCTACCCCCAAATCCCAGCGAACCAAAATGGGCAAATCTGAAGACAATGATAAGAAGAACATGGGTAAGAAACTCAAAGATTTGGAAATAAGCGTTCCAATAGTGTATGGGAACATAGCATTTTGGCTTGGCAAAAAGGCTAGCGAGTATCAGTCGCATAAATGGACAGTATATGTTCGTGGAGCAACCAATGAGGATCTTGGGGCGATAGTAAAGCGTGTTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCAACACGTGTTGTGGAGTCACCACCTTTTGAACTCTCAGAGGCAGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTCCACAGTGATGTTTGTGACAAACCTTTGAACTTATACCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCGCAAAGAAGCCTGTTGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCAGAGGCTTTTTTAGCTCGTGTGCAGAGTCATTCAGCAGTGAACTTGCCAAGATTACCTGCTGGAATTACGTTGCCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACCAAAGACCATTCTTTAAGTCAATGGTTCACGAATTTCTCAGAAGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGACAGCAGGTTCAAGCACATATTGCTAAACTCAGACGACAGATAAACTTGATTGATGGACAGCATCAGCAGCAGTTTAAATCTTCTTCTGACCAGTAG 825 0.4279 MTNSSSSKKHGQDQPELSGPTPKSQRTKMGKSEDNDKKNMGKKLKDLEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRGATNEDLGAIVKRVVFQLHSSFNNPTRVVESPPFELSEAGWGEFEVAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSAKKPVVVEFYDEIVFPDPSEAFLARVQSHSAVNLPRLPAGITLPPPIPVEDASKRRKGDTKDHSLSQWFTNFSEADELLQLAAARQQVQAHIAKLRRQINLIDGQHQQQFKSSSDQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0389 274 Coils Coil 236 256 - -
Pvu11g0389 274 PANTHER YEATS DOMAIN 16 270 IPR005033 GO:0006355
Pvu11g0389 274 MobiDBLite consensus disorder prediction 1 41 - -
Pvu11g0389 274 MobiDBLite consensus disorder prediction 27 41 - -
Pvu11g0389 274 MobiDBLite consensus disorder prediction 1 26 - -
Pvu11g0389 274 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 270 - -
Pvu11g0389 274 CDD YEATS_TFIID14_like 49 180 - -
Pvu11g0389 274 Pfam YEATS family 71 150 IPR005033 GO:0006355
Pvu11g0389 274 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Pvu11g0389 274 Gene3D YEATS domain 44 196 IPR038704 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0389 Pvu-Chr11 3275058 3278525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0389 K11341 - gmx:100790602 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0389 11 3275058 3278525 Pvu11g0389 11 3275058 3278525 ECH