Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0387 ATGGGTTTCCGCATACTAGGTATTATTAGACAGTCATCTACTCGCAAGGGACTTGAAGTCCCAAAAGGCCATCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTTGTGATTCCAGTATCATTCCTGAACCAACCTTCATTTCAACAATTACTAAGTCAAGCTGAAGAACAGTTTGGATTTGATCATCCAACAGGTGGTCTCACAATTCCATGCAGGGAGGATGAGTTTCTGAACCTCACTTCTCGCTTGAATGAGCTGTAA 264 0.428 MGFRILGIIRQSSTRKGLEVPKGHLAVYVGDKMRRFVIPVSFLNQPSFQQLLSQAEEQFGFDHPTGGLTIPCREDEFLNLTSRLNEL* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0387 87 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 86 IPR003676 GO:0009733
Pvu11g0387 87 PANTHER AUXIN-INDUCED PROTEIN 10A5 5 86 - -
Pvu11g0387 87 Pfam Auxin responsive protein 14 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0387 Pvu-Chr11 3267689 3268209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0387 19 77 Calmodulin-binding Proteins AT3G43120 57.627 6.63e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0387 K14488 - gmx:100782363 155.992