Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0385 ATGGGTTTTCGGTTACCTGGTATCAGAAAGGCAACCCTTGCTGCAATACAAGGATCTTCAAAAGTCTTGGATGTGCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAACGGTTTGTGATCCCCGTATCATACTTGAACCAACCTTCATTTCAAGATCTGCTGAGTCAAGTTGAGGAAGAATTCGGGTATCACCATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTAGATACCACTTCTCGCTTGAATAGGTGCTAA 279 0.4373 MGFRLPGIRKATLAAIQGSSKVLDVPKGYLAVYVGEKMKRFVIPVSYLNQPSFQDLLSQVEEEFGYHHPMGGLTIPCREDVFLDTTSRLNRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0385 92 Pfam Auxin responsive protein 19 87 IPR003676 GO:0009733
Pvu11g0385 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Pvu11g0385 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0385 Pvu-Chr11 3257292 3257910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0385 24 82 Calmodulin-binding Proteins AT3G43120 54.237 5.34e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0385 K14488 - gmx:100795597 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0385 11 3257292 3257910 Pvu11g0385 11 3257292 3257910 ECH