Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0378 ATGGGTTTCCGTTTACCAGGTATTCGACGGCCATCAGTCACAGCTATGCAGGCAACCTCAAAACCTGTAGAAGTCCCAAAGGGCTATCTTGCTGTGTATGTTGGAGTGAAACAGACACGGTTTGTGATTCCTATATCATATTTGAACCAACCTTCATTTCAAGACTTATTGAGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGCGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACATATAGCTTCTCGCTTGAATAGACAATAA 279 0.4337 MGFRLPGIRRPSVTAMQATSKPVEVPKGYLAVYVGVKQTRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQHIASRLNRQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0378 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Pvu11g0378 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Pvu11g0378 92 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0378 Pvu-Chr11 3216240 3217099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0378 14 85 Calmodulin-binding Proteins AT3G43120 50.000 7.11e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0378 K14488 - gmx:100816803 156.377