Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0376 ATGATGGGTATTCGTTTGCCGTTTATGGTTAATGCAAAACAGACATGGTTGAAGTCGAACAACGTTCCAAAGGGTCACGTGGCAGTTTACGTTGGAGATGTCGAAAAGAAGAGGTTTGTGGTTCCAATATCATATTTGAAGCACCCTTTGTTTCTGGATTTGCTGAACCAAGCAGAAGAAGAGTTTGGGTTCAACCATCCCATGGGGGGTCTCACGATTCCTTGCAAAGAAGACGCTTTCATCAATCTCACTTCTCGAATGCGTGCCTTCTGA 273 0.4432 MMGIRLPFMVNAKQTWLKSNNVPKGHVAVYVGDVEKKRFVVPISYLKHPLFLDLLNQAEEEFGFNHPMGGLTIPCKEDAFINLTSRMRAF* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0376 90 PANTHER SMALL AUXIN-UP RNA-RELATED 14 87 - -
Pvu11g0376 90 Pfam Auxin responsive protein 18 85 IPR003676 GO:0009733
Pvu11g0376 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0376 Pvu-Chr11 3186345 3186617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0376 14 80 Calmodulin-binding Proteins AT5G20810 53.731 5.32e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0376 K14488 - gmx:100803474 152.14