Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0373 ATGGAAGTTAACCTCTCTCTCAACCGACACCGCGCCCTCTCCCTAACCTCCCGCGCTCCGCTCTCCGTTCTCCGCTCACACTTCCTCGCCTCCACTCACTCCCTCCGTCCGCCTCCCACGCCGCTCTCCCTTCGCTCCCGGAACAAACGCACCACCAGCCGCAATTTAGGTCTCCTCCGCTTCCACTCCCCGCGCTTCGTCTACAAGGCCTCCCTCCATTCCCACTCCCTCGTTGTCCTCGTCATCGTCGTCACTTTATCCGCCGTTTCCTGGCTTCACTTCACTCTCACCAAGAAAAAAAACGACTCTCTTAACCAGACACGGGGGCATGCGAAGTTCGCGTTATCGCCTCAAGGAACTAACGTTGGGAGTCAGGTCATTGATGGCGAGATTCTTGGTTTTACGGAATTTCAAAGGGATAGCGCGCTGAGTGAGATTGGGAAGTTGAAGGATCACCATGGGGAAGAGTACCGGGTGTTTGAGGAAAACGAGATCCACCTCCCGTTTTTGAAATCTTCGGTGGTACAAGAAGTGGCCCTCGCCGCTGAGACTTCAGAGTCATCTTCTACTGTTCTTGACTCTGGTGTGAATAATAATAGTAATAATAATAGTTTCAAGGTGTTGGATGAGTCTTTTTCATCCGTGGGTTTCTCATCAAGTTCATTACCACCTCTAGAGTTCGCTGAGGAAATGGTTATACAAGTGGAAGAAAGTCAAGATAAAGTTGACTCTGATCCCGAGTTGTCTTTAAATAACGTCGAGTCTGAGCATACTGCTTCTTCTGTTCGCGTAAACAACGCACTGGCAACTGTTGGTGGACATACTAAAGAAAAAATTGAATTTGGTTCCATCAACGGTGACGTCGTTTTTGGGGAGTCAGTTAGGGAAGGGCTTTACATGTTTTATGAGGTTAACAAGCCTGCAACTGGTTCTATGACACCACTGAGTGGTTTAAAGCCATTATCTCCCCGTGCTTCTTTTATGAATAAAAAAAGATCGCCCTCAGTGATGGGAAATGTCACACTGAAAGGAACAGGGTTATCTACAGATATTCCTCTACAAAATGCAGAACATGTCAAAGGAGCAGCTGAAGTTTCCAGTCATAAAGATGGCTACCCTCTGCAACATGTGAGTAAAAACTTGAGGAGAGGCAGAAGCTTTTCAGGAGACAGGGAAAGGACAAACATGGATTACAATAATAACACAGTTTTCCCCCAGAATACTACTCTCTCAATGAAGATGCATATTGATCTGAAAAACGATCAAATCATGGTGCATGATGATCAGAAAAATGTTCCTTCGGAGCATCTAAGCAAATATAATAATTTGCTAAAAGTTGGGAGGCTACATGAATGTGTAGAATTGCTTAAACATATGGAAACAAAGGGTTTATTAGACATGACTAAGGTTTATCATGCCAAGTTTTTTAACATCTGCAAGAAGCGAAAGGCTGTTAATGAAGCGTTTGATTACATTATGCTCATTCCAAATCCAACGCTGAGTACATTTAACATGCTTATGTCAGTGTGCGCAAGCTCCCAAGATTCGGAAAGGGCTTTCCATGTTTTGCAGCTTCTTAAGAATGCTCAACTAGAACCTGATTGCAAACTTTATACCACTCTGATATTAACTTGTGCAAAGAGTGGAAAAGTTGATCTAATGTTTGAAGTGTTTCACAAGATGGTTAATTCTGGAGTCGAACCTAACGTACATACCTACGGAGCACTTATTGATGGTTGTGCTAGAGCTGGGCAAGTGGCTAAAGCATTTGGTGCTTATGGAATAATGAGGTCAAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCTTGTGCCCAATCAGGAGCTGTAGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATGCAGCCCATGGACCCTGATCACGTAACTATAGGTGCATTGTTGAAGGCATGCACTAAAGCTGGTCAGGTTGAACGAGCAAAAGAAGTGTACAAGATGTTACAAAAATATAACATAAAGGGATGTCCAGAAGTTTACACCATTGCCATTAATTCGTGCAGCCAAACTGGGGATTGGGAATTTGCTCTTGCTGTATACAATGACATGACCCAGAAAGGGATCCTCCCAGATGAGATATTTCTGAGTGCACTGATAGATGTTGCTGGTCATGCTAAAGATCTGGATGCTGCCTTTGATGTTCTACAAGAAGCCCGTGAAGGAGGAATACGTATTGGAATAATGTCATATAGCTCATTGATGGGTGCCTGTAGTAATGCAAGAAATTGGCAGAAAGCATTGGAGCTATATGAATATCTTAAATCTCTTAAATTGAGAATGACCGTTTCAACAATTAATGCTTTGCTGACTGCACTTTGTGATGGAGATCAATTTCACAAGGCTATGGAAATATTTTTTGAAATGAAAGGATTAGGATTGAGCCCAAACAGTATCACTTTCTCGATACTTATAGTGGCAAGTGAGAAAAAGGATGATATGGAGGCTGCTCAAATGCTCCTTTCTCAAGCCAAAAAAGATGGTGTAGTCACTAATCTCATAATTTGTCGATGCATAATTGGAATGTGCCTGCGGAGATTTGAGATGGCTTGCAGTGCTGGTGAGCCTGTTTTATCTTTTCACTCAGGACGGCCACAAGTTGATAATAAATGGACATCATTGGCCATAATGGTGTTTCGTGAAACAATTGAAGCTGGTCAAAAACCTACAAGTGAAATATTGTCGCAAATTCTGGGATGCCTGCAACTCCCTTATGATACATCTCTGAAAAATAGACTTGTTGAGAACCTAGGAGTAAGTGCAGAAACTTCAAGAGGATCAAACCTTTGTTCATTAATGGAGGGATTTGGTGAATACGATCCTCGTGCTTTTTCAATACTTGAGGAATCCGCTTCATATGGACTTGTTCCATCTGTATCATTTAAAATGAGTCCCATTGTTATTGATGTTAAAGAATTGCATGTTTCTACTGCTGAGGTGTACATCATAACAGTTTTGAAAGGTCTCAAGCATAGACTAGCAGCAG 3043 0.4262 MEVNLSLNRHRALSLTSRAPLSVLRSHFLASTHSLRPPPTPLSLRSRNKRTTSRNLGLLRFHSPRFVYKASLHSHSLVVLVIVVTLSAVSWLHFTLTKKKNDSLNQTRGHAKFALSPQGTNVGSQVIDGEILGFTEFQRDSALSEIGKLKDHHGEEYRVFEENEIHLPFLKSSVVQEVALAAETSESSSTVLDSGVNNNSNNNSFKVLDESFSSVGFSSSSLPPLEFAEEMVIQVEESQDKVDSDPELSLNNVESEHTASSVRVNNALATVGGHTKEKIEFGSINGDVVFGESVREGLYMFYEVNKPATGSMTPLSGLKPLSPRASFMNKKRSPSVMGNVTLKGTGLSTDIPLQNAEHVKGAAEVSSHKDGYPLQHVSKNLRRGRSFSGDRERTNMDYNNNTVFPQNTTLSMKMHIDLKNDQIMVHDDQKNVPSEHLSKYNNLLKVGRLHECVELLKHMETKGLLDMTKVYHAKFFNICKKRKAVNEAFDYIMLIPNPTLSTFNMLMSVCASSQDSERAFHVLQLLKNAQLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEMQPMDPDHVTIGALLKACTKAGQVERAKEVYKMLQKYNIKGCPEVYTIAINSCSQTGDWEFALAVYNDMTQKGILPDEIFLSALIDVAGHAKDLDAAFDVLQEAREGGIRIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLRMTVSTINALLTALCDGDQFHKAMEIFFEMKGLGLSPNSITFSILIVASEKKDDMEAAQMLLSQAKKDGVVTNLIICRCIIGMCLRRFEMACSAGEPVLSFHSGRPQVDNKWTSLAIMVFRETIEAGQKPTSEILSQILGCLQLPYDTSLKNRLVENLGVSAETSRGSNLCSLMEGFGEYDPRAFSILEESASYGLVPSVSFKMSPIVIDVKELHVSTAEVYIITVLKGLKHRLAA 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 676 710 IPR002885 -
Pvu11g0373 1014 Pfam Pentatricopeptide repeat domain 804 862 IPR002885 -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 641 675 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 537 570 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 749 780 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 784 816 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 502 535 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 643 674 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 679 712 IPR002885 -
Pvu11g0373 1014 TIGRFAM PPR: pentatricopeptide repeat domain 571 604 IPR002885 -
Pvu11g0373 1014 Pfam PPR repeat 443 464 IPR002885 -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 499 533 IPR002885 -
Pvu11g0373 1014 Pfam Pentacotripeptide-repeat region of PRORP 649 791 IPR033443 -
Pvu11g0373 1014 Pfam Pentacotripeptide-repeat region of PRORP 502 636 IPR033443 -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 781 815 IPR002885 -
Pvu11g0373 1014 Gene3D Tetratricopeptide repeat domain 723 948 IPR011990 GO:0005515
Pvu11g0373 1014 Gene3D Tetratricopeptide repeat domain 441 635 IPR011990 GO:0005515
Pvu11g0373 1014 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 70 1014 - -
Pvu11g0373 1014 Gene3D Tetratricopeptide repeat domain 636 722 IPR011990 GO:0005515
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 569 603 IPR002885 -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 534 568 IPR002885 -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 746 780 IPR002885 -
Pvu11g0373 1014 Coils Coil 826 846 - -
Pvu11g0373 1014 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 604 634 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0373 407 851 Glycosyltransferase AT1G05670 25.442 2.35e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0373 - - pvu:PHAVU_011G0363001 1935.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0373 11 3172447 3180772 Pvu11g0373 11 3172447 3180772 ECH