Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0363 ATGTCAACGATCAAATTTGCTTTGATTACCTTGCTTTTCATCACTGTTTCACTGAGCTTTGCGTCCGGTGTCAAGGGAGACAAGAAGAAGAATGATTCTAGCGCAGATGATGGAGGCCAGAAGAGGGAAGTCACCTACGATGGCAGGTCACTCATTATCAATGGAAAACGGGAGCTTCTCTTCTCCGGTTCCGTCCATTACCCTAGAAGTCCCCCTGAGTCATGGCCAATGCTTATTGACAAAGCAAGACGTGGAGGCATAAACGTGATTCAAACTTACATCTTCTGGAACATTCATGAGACTGAGAAAGGCAAGTTCAAAATGGATCCGGAGTATGATTTCGTAAGGTTCATGCAGATCTGCCATGAGAAAGGAATGTATGTTACCCTCAGGCTTGGGCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCGTATTGGCTAAGAGAGGTCCCTGAGATCATATTCCGCTCTAACAATGAACCCTTTAAGATGCACATGAAAGAGTATACATCAAATGTTATAAAAGTATTGCAAGACGCGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAGATCGAGAATGAGTACAACCATATCCAACGTGCTTTTAGAGAGGAAGGAACTAATTACGTCCAATGGGCCGCAAAAATGGCAGTGGCAATGGATGTTGGAGTTCCATGGATCATGTGCAAGCAAACGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTTTCAGGCCCCAACAAACCTCACAAGCCTTACCTGTGGACTGAAAACTGGACTGCTCAGTATAGGGTGTTTGGAGATCCACCATCCCAAAGATCAGCAGAAGACATTGCCTTTTCTGTTGCCCGCTTCTTCTCTAAGAATGGGTCTTTGGTGAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTCAGTACAACCCGATATTACGATGAAGCTCCTCTTGATGAGTTCGGTTTGCAGAGAAATCCAAAATGGTCTCACCTGAGGGACGTGCACAAGGCATTGAACCTATGCAGGAAGGCCCTGTTCGGGGGTCAATCAGTAATCACAAAACTAACCCATCATCATGAGATTATAGTTTACGAGAAGCCAGGTAGTGACTTATGTGCTGCTTTCATCACCAACAACCACACCAAAACACCAATCGACATAAAATTCAGAGGTTCCACTTATCATCTGCCACCACGTTCCATTAGTATCCTCCCTGACTGCAAGACTGTGGTCTTCAACACCCAACATGTTGCTTCAGAACATAATTCAAGGAACTTCAGGAAGACAAAAAATTCAAACAATCTCAAGTGGGAGGTGTTTACTGAGGCCATTCCAAACGCCAAGGATATACCAGTTGTTTTAAATGTTCCCACGGAGCTTTATAGCTTGCTTAGAGACGTCACCGACTATGCATGGTACACCACCAGCGTGGAATTGGGTCCTGGAGACTTGCCAAGGAAGGATGAGATATCCCCTGTTCTTCGTATCATGAGTCTAGGCCATGCACTACATGCCTTTATAAATGGAGAATATATTGGAACAAATCATGGTACCCATGAAGAAAAAGGTTTTGAATTCCAGAAACCTGTAACCTTTAAGGTTGGAGTTAACTACATATCTATATTGGCTTGCACTGTTGGACTACCTGACAGTGGAGCATACATGGAGCACAGGTATGCTGGACCCAAGTCTATACTCATCCTTGGTCTTAACTCCGGAAAAATTGATCTCACTTCTAATGGTTGGGGTGCTAAGGCTGGTATCCGAGGTGAGGAACTTGCCATTTTCACTGAGCAGGGATCAAAGAAAGTAGAATGGAAAGAAGTCAAGGGAACTGGAAGTGTTCTCTCGTGGTACAAGACAAATTTTGCAACGCCAGATGGAAGAGATCCTGTTGCCATAAGGATGACTGGTATGGGGAAGGGAATGATATGGATCAATGGTAAAAGCATTGGTCGTCATTGGATGAGCTTCCTCTCTCCCCTCGGAACTCCTACTCAGTTAGAGTACCACATCCCACGAATTTACCTCAATCCAAAAGACAACTTGCTTGTTATATTTGAGGAAGAGAGAGCAAACCCAGAAAAGATTGAGATCGAAACTGTTGACAGAGATACAGTATGCAGTTTCATCACAGAGAATCAGCCCCCCAACATCAATTCATGGGCATGTAAGGCTGGGAAGTTCCTCTCTGTTGTGGACAAACTAGCGCCAGCAGCAACAATCACATGTCCAACCTACAAAACCATTAAGGCTGTGGAGTTTGCAAGCTTTGGTGATCCTACGGGTATCTGTGGAGCCTTTGTTATGGGAAAATGTGATGCACCTGCCACAAAGCAGATTGTTGAACAGCATTGCCTGGGAAAACAGTCATGCACGATTCCAGTTGATGCAGCAACCTTCATCAAGGGCAAAGATGCTTGCCCAGATGTGATCAAGTCACTTGCAGTCCAAGCCAAGTGTGACTACTAG 2529 0.4492 MSTIKFALITLLFITVSLSFASGVKGDKKKNDSSADDGGQKREVTYDGRSLIINGKRELLFSGSVHYPRSPPESWPMLIDKARRGGINVIQTYIFWNIHETEKGKFKMDPEYDFVRFMQICHEKGMYVTLRLGPFIQAEWNHGGLPYWLREVPEIIFRSNNEPFKMHMKEYTSNVIKVLQDAKLFAPQGGPIILAQIENEYNHIQRAFREEGTNYVQWAAKMAVAMDVGVPWIMCKQTDAPDPVINACNGRHCGDTFSGPNKPHKPYLWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLQRNPKWSHLRDVHKALNLCRKALFGGQSVITKLTHHHEIIVYEKPGSDLCAAFITNNHTKTPIDIKFRGSTYHLPPRSISILPDCKTVVFNTQHVASEHNSRNFRKTKNSNNLKWEVFTEAIPNAKDIPVVLNVPTELYSLLRDVTDYAWYTTSVELGPGDLPRKDEISPVLRIMSLGHALHAFINGEYIGTNHGTHEEKGFEFQKPVTFKVGVNYISILACTVGLPDSGAYMEHRYAGPKSILILGLNSGKIDLTSNGWGAKAGIRGEELAIFTEQGSKKVEWKEVKGTGSVLSWYKTNFATPDGRDPVAIRMTGMGKGMIWINGKSIGRHWMSFLSPLGTPTQLEYHIPRIYLNPKDNLLVIFEEERANPEKIEIETVDRDTVCSFITENQPPNINSWACKAGKFLSVVDKLAPAATITCPTYKTIKAVEFASFGDPTGICGAFVMGKCDAPATKQIVEQHCLGKQSCTIPVDAATFIKGKDACPDVIKSLAVQAKCDY* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0363 842 Pfam Galactose binding lectin domain 761 840 IPR000922 GO:0030246
Pvu11g0363 842 PANTHER BETA-GALACTOSIDASE RELATED 36 837 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 189 201 IPR019801 GO:0004553|GO:0005975
Pvu11g0363 842 SUPERFAMILY (Trans)glycosidases 43 360 IPR017853 -
Pvu11g0363 842 Pfam Beta-sandwich domain in beta galactosidase 365 436 IPR041392 -
Pvu11g0363 842 Gene3D Glycosidases 40 360 - -
Pvu11g0363 842 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 36 837 - -
Pvu11g0363 842 SUPERFAMILY Galactose-binding domain-like 599 745 IPR008979 -
Pvu11g0363 842 SUPERFAMILY Galactose-binding domain-like 420 581 IPR008979 -
Pvu11g0363 842 Pfam Glycosyl hydrolases family 35 50 356 IPR031330 -
Pvu11g0363 842 Gene3D - 756 842 IPR043159 -
Pvu11g0363 842 Gene3D - 605 732 - -
Pvu11g0363 842 ProSiteProfiles SUEL-type lectin domain profile. 757 841 IPR000922 GO:0030246
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 54 71 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 75 93 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 130 149 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 187 202 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 268 283 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 305 320 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 324 340 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 633 647 IPR001944 GO:0004553|GO:0005975
Pvu11g0363 842 PRINTS Glycosyl hydrolase family 35 signature 660 676 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0363 Pvu-Chr11 3104496 3108968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0363 19 840 Glycoside Hydrolase AT2G16730 58.475 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0363 - - gmx:102663614 1373.99