Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0356 ATGGCGATGGCTTTCAAAATGGCGACTACAGGGATGTGGGTGACGGATGAGTGCAAGAACTCATTCATGGAAATGAAGTGGAAGAAGGTGCATAGATACATAGTGTTCAAGATCGATGAAAAGTCAAGGCTTGTGACCGTTGATAAGGTGGGTGGTCCCGGCGAAAGCTATGGTGATCTTGCAGCGTCCTTGCCAAACGACGATTGTAGATATGCCGTGTTCGATTTTGACTTTGTCACCGTTGATAACTGCCGGAAGAGCAAGATCTTCTTCATTGCATGGTCTCCAACAGCATCTAGGATAAGAGCAAAGATGCTGTACGCAACATCAAAGGATGGGCTGAGAAGAGCCTTGGATGGCATCAGCTATGAAGTTCAGGCCACTGACCCAACTGAGATGGGATTCGATGTAATTCAAGACAGAGCCAAATAG 432 0.4676 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKSRLVTVDKVGGPGESYGDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRALDGISYEVQATDPTEMGFDVIQDRAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0356 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Pvu11g0356 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Pvu11g0356 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Pvu11g0356 143 SMART adf_2 16 143 IPR002108 GO:0003779
Pvu11g0356 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Pvu11g0356 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Pvu11g0356 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Pvu11g0356 143 Gene3D Severin 2 143 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0356 Pvu-Chr11 3026730 3028012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0356 K05765 - gmx:100801857 293.123