Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0345 ATGGGTTCCCAGGTCTCCAAACAGGTTGAGAAACGAAAGGCAATCGAAAGAGAGGGAAAAACTCTGTCTGATCTCAGAAACTCTGGGGAAGACTACCCTGGCTCAGATTACCATCCATCTGACAGAAAAAACTGGATGTCCCAACTCAACCCAGAGAAAGTTGCGATAAAACAAATTGTTTGGCCTGGAACCCATGATTCTGCAACCAACAAGATTGGCATCCCAGGCATCACTCGCCCTTTTGCTCAATGCCAATCCTTGTCCATCTACAAGCAGCTTGTGATGGGGACAAGGCTCGTTGACATTCGGGTGCAAGAGGATCGCAGAGTGTGCCACGGAGTCCTCCTTACGTACAGCATGGACGTTGTCATCAAAGATATCAAGAAATTCTTATCAGAAACCCAATCTGAAATCATCATTCTTGAGGTTAGAACCTATCCTTGA 444 0.4617 MGSQVSKQVEKRKAIEREGKTLSDLRNSGEDYPGSDYHPSDRKNWMSQLNPEKVAIKQIVWPGTHDSATNKIGIPGITRPFAQCQSLSIYKQLVMGTRLVDIRVQEDRRVCHGVLLTYSMDVVIKDIKKFLSETQSEIIILEVRTYP* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0345 147 SUPERFAMILY PLC-like phosphodiesterases 41 145 IPR017946 GO:0006629|GO:0008081
Pvu11g0345 147 PANTHER UNCHARACTERIZED 7 145 - -
Pvu11g0345 147 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 147 IPR017946 GO:0006629|GO:0008081
Pvu11g0345 147 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 146 - -
Pvu11g0345 147 MobiDBLite consensus disorder prediction 9 25 - -
Pvu11g0345 147 MobiDBLite consensus disorder prediction 1 44 - -
Pvu11g0345 147 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 145 - -
Pvu11g0345 147 Pfam Phosphatidylinositol-specific phospholipase C, X domain 81 142 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0345 Pvu-Chr11 2912726 2913549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0345 1 145 Acyl Lipid Metabolism Gene Families AT4G38690 69.863 8.13e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0345 - - pvu:PHAVU_011G033600g 297.36