Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0343 ATGGATTATGAGGCTGGTGGTTTTGGTGCCAATGGCGAGGGAGAGAGCAAGAGAGTTGGTGAGGGGGTTTCTGAGGAGAGTGTGGTGGGGTCTGATAGTTTGAAGAGTTTAGATGTAGAGGGGGATTTTCAGGAGGCAATGGAGCCACGGGAGCAGGCTCATGATCAAGGATCCGAACTCCTTTCGGAGGAGGCTGTGGTTGATAAACAGGATGATGCCAACACTGCTGGTGCATTGACTTCGGCTTTGGTGGATGAAAAAGGTCCAGATGTCGTTCAGGAGCATGATTCCTCTGAGGAGGCTGATTCTGAGAATGGGAAGCTGGGGGAAACCGATGCAATTGCTTATCAGGATTTGGAAAGGGATGGGCCGGGAACTCATAGTGTTCATCTGGATGGTGTTGCTTCTGGAGTGTCTGGGGATGGAGGTTTTTGTGATGGTTCTAATGGTGTGGTGGATGATAATTTGGAGCGCAGTGATGGGGGTGGTGGGAAGGAAGATTCTGGGTTAAATTCTGATGTAGAGGTGGTAGTTAAGGAGAATGGTGTTGTGGAGGATGAAAACTCTGGTTTGATGAGTGAGAAAGCTGAAGAAGTTGATGATTCTGAATTCATGACTCCTAGACAAAATGGTGTTAGAACATTGGATGATGTAAGCACAGACAAGGAGGACGATGTTGACGGTGTCGCCACTGAGGTTATTATCAAATCTGAATCCAGTGAGGTGATTCCAGCTGAAGGTACTGATGCTGGGGATTTGAAGGAGTGCGACGCAGATCCTGAACTTGGAGATGACAATATAGAGGTAAACTTAAATGCTTCAGCCGATTCCTCTGGTGAGATTCAAGATGATACATGTGAAGAAGTACATGGCAATTCAGCTCACATTACTTTAGAACAACAGGATGAAGTAACTAGGGATGTGAAGGATGTTACTCTGGGCACTGATATAAGCCATGAGGATATAATTGGTGAAGAAATGAGTACCCCTGGCATTCAGAATGCTGAAGTAACTAGTTATGAAAATGGTGATGGCGAACATGAAAACTCATCCTTTTTGGATAATCCCTCAACTAAGGAGACATTGCCTATTCAGGAGGCTAGTGCAGCTGATCCAAAGGAAGGAAGTAATAAGGATGATCAATCTCAGATTTCAGATGAAAATCAGAGAGATGATGACAACTCTTTTGTGGTTGAAGAGCCTGAAAGGACACAAGAAAAGATTATTCAAGAGACAGAAACCACACAAGAGACTGGAGAGCAACCTGTTCAACCTTCAGCAGATATTTCTTCTTCAACTGAAAATTCTTCTGCTGCTGGGCCTCGACCTCTTCTTCCTTCATCGGAAAATTCAACTGGTGCTGGGCCTCGACCTGTTTTTCCTTCATCTGAAAATTCTGCTGGGCCTCGACCTGTTCTTCCTTCATCTGAAAATTCTGCTGTTGCTGGGCCTCGACCTGTTCTTCCTTCATTTAAAAATTCTGCTGCTGCAGGGCCTCGACCTATTCTTCCTTCATCTGAAAATTCTGCTGCTGCTGGGCCCACTCCTGTTCTTCCAGCCGGCCTTGGTCGTGCAGCCCCATTGCTGGAACCTGCCTCTCGGCTCGTGCAGCAGCCTCGTGCTAATGGTACTGTGTCTAACACTCAGTCCCAGCAAATGGAAGACTCCTCGAGTGGGGAGGCTGAGGAGTATGATGAGACGCGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCACAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGGGGCCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCTGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATAATGGTCCTTGGAAAGACTGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACTAGTGCTTTTAATATGGGAACCAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGTATTAAGGTACGGGTCATTGATACGCCAGGACTTCTACCTTCCTGGTCAGACCAGCGAAGCAATGAGAAGATCCTCCTCTCTGTGAAGAACTTCATTAAGAAAACTCCTCCTGATATTGTGTTATATCTTGATAGGTTAGATATGCAAAGCAGGGATTTTAGTGACATGCCACTCTTACGCACAATTACAGAAATTTTTGGGCCATCCATTTGGTTCAATGCTATTGTGGTTCTGACTCATGCAGCATCTGCTCCCCCTGAAGGCCCCAATGGCACTGCTTCCAGTTATGACATGTTTGTTACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGCCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTAGAGAACCACTCTGCTTGCCGAATAAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAGCCTCATTTGTTACTTTTATCTTTTGCCTCTAAAATTCTGGCTGAAGCAAATGCTCTTCTAAAGTTACAAGATAGTCCACCTGGGAAGCCTTATATAGCTCGACGAGCACCTCCTTTACCTTTTCTTTTGTCAACCCTTCTTCAGTCAAGACCACAGTTAAAGTTGCCGCAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAGGCATCGGAATCTGATGATGAGAATGAACATGATGACTTGCCGCCATTTAAACCTTTAACAAAGGCCCAGGTGGAAAAGCTGTCTAAAGCTCATAAGAAAGCATATTTTGACGAGTTAGAGTATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAAGAAGAAAAAAAGCGACGGAAATTCATGAAGAAAATGGCAGAAGCAGCTAAAGATCTACCTAGTGATTACAGTGAAAATGTGGAAGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTTCCGATGCCAGATTTGGCCCTGCCTGCATCTTTTGATTCTGATAACCCCACTCACCGATATCGTTATCTTGATTCATCAAACCAGTGGCTTGTTAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGTCTGAATGTTGAAAGATTGTTCGTTGTCAAGGACAGGGTACCTTTGTCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATAGCCGGCTCAGTTAAGCATGGGGAAGGGAAAGCAACTTCATTAGGTTTCGATATGCAGACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAAGGCAACCGCTGGTCTCTCATTCACTTTACTTGGTGATGCCTTATCAGGTGGAGTTAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAGGGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAATGACATTGCTTATGGTGGCAGTTTGGAGGCTCAGTTGAGAGATAAGGATTACCCTTTAGGTCGTTTCTTATCCACTCTCGGGCTCTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAAATCCCAGTTGGACGACATACAAACCTGGTTGCCCGGGCCAATTTGAACAATCGAGGGGCAGGACAAATAAGTATTCGATTAAACAGTTCAGAACAGCTTCAAATTGCGTTGGTTGCTCTCATCCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCCACAATTGCAGTATGGACAATATTAA 3822 0.4498 MDYEAGGFGANGEGESKRVGEGVSEESVVGSDSLKSLDVEGDFQEAMEPREQAHDQGSELLSEEAVVDKQDDANTAGALTSALVDEKGPDVVQEHDSSEEADSENGKLGETDAIAYQDLERDGPGTHSVHLDGVASGVSGDGGFCDGSNGVVDDNLERSDGGGGKEDSGLNSDVEVVVKENGVVEDENSGLMSEKAEEVDDSEFMTPRQNGVRTLDDVSTDKEDDVDGVATEVIIKSESSEVIPAEGTDAGDLKECDADPELGDDNIEVNLNASADSSGEIQDDTCEEVHGNSAHITLEQQDEVTRDVKDVTLGTDISHEDIIGEEMSTPGIQNAEVTSYENGDGEHENSSFLDNPSTKETLPIQEASAADPKEGSNKDDQSQISDENQRDDDNSFVVEEPERTQEKIIQETETTQETGEQPVQPSADISSSTENSSAAGPRPLLPSSENSTGAGPRPVFPSSENSAGPRPVLPSSENSAVAGPRPVLPSFKNSAAAGPRPILPSSENSAAAGPTPVLPAGLGRAAPLLEPASRLVQQPRANGTVSNTQSQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFNMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRINRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARRAPPLPFLLSTLLQSRPQLKLPQEQFGDEDSLDDDLDEASESDDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKFMKKMAEAAKDLPSDYSENVEEEGGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDRVPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFRVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALVALIPLVKKLVGYPPQLQYGQY* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 537 557 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 38 70 - -
Pvu11g0343 1273 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 519 1273 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Pvu11g0343 1273 Pfam Translocase of chloroplast 159/132, membrane anchor domain 999 1262 IPR024283 -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 900 919 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 88 107 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 331 364 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 312 518 - -
Pvu11g0343 1273 Pfam AIG1 family 642 775 IPR006703 GO:0005525
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 411 459 - -
Pvu11g0343 1273 Gene3D - 611 859 IPR027417 -
Pvu11g0343 1273 CDD Toc34_like 614 859 - -
Pvu11g0343 1273 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 458 1267 IPR045058 -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 190 204 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 892 928 - -
Pvu11g0343 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 776 IPR027417 -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 536 566 - -
Pvu11g0343 1273 ProSiteProfiles AIG1-type G domain profile. 639 868 IPR006703 GO:0005525
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 372 410 - -
Pvu11g0343 1273 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 458 1267 - -
Pvu11g0343 1273 Coils Coil 961 981 - -
Pvu11g0343 1273 MobiDBLite consensus disorder prediction 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0343 Pvu-Chr11 2894269 2899835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0343 - - gmx:100810931 1836.23