Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0340 ATGAATTTATTTGTCTCATTTGTTTGTACCACAGGTTTTGAAGTTGATGCATTAGAATACGATTATTCTGCAAGTATTGAGTGTCTTACACATCCATTAAAGCCTCAATATAAAGGAGGAATCATTAAAAACCCAGAACTAAATAATGGAGTTGAAGGATGGACTTCATTTGGGGATGCAAAAATAGAACATAGAGAATCATCAGGCAACAAATATGTGGTGGCACATAGCAGAAAAAAAGCTTATGATAGTGTCTCTCAAAATATTCAAATAGAAAAGGACAAACATTATACTTTATCTGCTTGGATACAAGTGAGTAAGGGGAATGTCCTTGTAACTGCATTTGTGAAAACAAGAACAGGATCAAAATTTGGTGGTGCCATTTTTGCTGAGACTAATTGCTGGTCTATGCTCAAGGGTGGTTTCACAGCTGAAGAATCAGGACCAGCAGAGCTCTATTTTGAGGGAAACGATACTTCCGTCGATATATGGATAGACAGCGTTTCCTTACAACCATTTACAGAGAAAGAATGGAGTTCTCATCAAGATCAAAGCATTGAGAAGATTCGCAAGAGGAAGGTATTGATCCAAGCACTGAATGAAGAAGGAAAACCTTTAGCAAATGCAAATGTATCTTTTGCATTGAAGAAGTTAGGTTTTCCTTTTGGGAGTTCCATGAACAAATACATCCTAAACAACAAATTATACCAAAATTGGTTCACCTCTAGATTCACAGTGACCACGTTTGAGAATGAAATGAAGTGGTACAGCACTGAAGCTGTGAAAGGTAAGGTAGACTACACAACTGCAGATGCTATGTTGCAGTTTGCTAAGCAGCACAACATAGAAGTTCGAGGCCATAACGTGTTTTGGGATGATCCTCATTACCAACCTAGTTGGGTTCCTTCACTATCCCCAACCCAACTTTCCTCTGCAGTGGAAGAAAGGGTCAAATCTGTTGTGTCAAAATACAAGGGCAAGCTTATTTCATGGGATGTTGTCAATGAGAATATGCACTTTTCATTCTACGAAAGCAAACTTGGAAAAACCTTTTCAGGCAAAATCTTCAATGAGGTTCACAAAATTGATGGACAAACCACTTTGTTCCTGAATGACTATAACACCATTGAGGAAATTAGTGATGGTGAATCAAGCCCAGCAAGGTACTTGCAGAAGATTAAACAAATTCAGAGTTATGCTGGGAATAGAGGAATCCCAATGGGAATTGGGCTTGAGTCCCACTTTTCTCATGCTATTAATTTTCCCTACATGAGATCATCTTTGGATTATCTTGGTGCCACTCGTTTGCCCATTTGGATTACAGAATTAGATGTTGCAAGTCAACCTAGGCAGTTACAATACTTTGAACTTGCTCTTAAAGAGGCACACAGTCACCCTATGGTGAGAGGCATTGTGATGTGGACAGCATGGTCACCACAGGGTTGCTACAAGCTTTGCTTAGTTGATAACAATTTCAAGAACTTGCCTGCAGGGAACGTTGTGGACAAATTCATTTCTCAGTGGAAATCAAACAAATTATCAGGAGTTACAGATAAAAATGGATTCCTTGAGATCACTCTTTTTCATGGTGATTATGAAATGGAGATTCTTCATCCTAATCAAAAGAACAACACTTTTACACAGATCCTAAAAGTAACTCCCTCAGATAAATCCAATCAAACACAACCACTTGTAAAACTTCAAATAAAGTAA 1713 0.3818 MNLFVSFVCTTGFEVDALEYDYSASIECLTHPLKPQYKGGIIKNPELNNGVEGWTSFGDAKIEHRESSGNKYVVAHSRKKAYDSVSQNIQIEKDKHYTLSAWIQVSKGNVLVTAFVKTRTGSKFGGAIFAETNCWSMLKGGFTAEESGPAELYFEGNDTSVDIWIDSVSLQPFTEKEWSSHQDQSIEKIRKRKVLIQALNEEGKPLANANVSFALKKLGFPFGSSMNKYILNNKLYQNWFTSRFTVTTFENEMKWYSTEAVKGKVDYTTADAMLQFAKQHNIEVRGHNVFWDDPHYQPSWVPSLSPTQLSSAVEERVKSVVSKYKGKLISWDVVNENMHFSFYESKLGKTFSGKIFNEVHKIDGQTTLFLNDYNTIEEISDGESSPARYLQKIKQIQSYAGNRGIPMGIGLESHFSHAINFPYMRSSLDYLGATRLPIWITELDVASQPRQLQYFELALKEAHSHPMVRGIVMWTAWSPQGCYKLCLVDNNFKNLPAGNVVDKFISQWKSNKLSGVTDKNGFLEITLFHGDYEMEILHPNQKNNTFTQILKVTPSDKSNQTQPLVKLQIK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0340 570 Gene3D - 30 174 - -
Pvu11g0340 570 Pfam Carbohydrate binding domain 40 156 IPR003305 GO:0016798
Pvu11g0340 570 Gene3D Glycosidases 207 518 - -
Pvu11g0340 570 PANTHER GLYCOSYL HYDROLASE 9 561 IPR044846 GO:0004553|GO:0005975
Pvu11g0340 570 SUPERFAMILY (Trans)glycosidases 204 512 IPR017853 -
Pvu11g0340 570 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 9 561 - -
Pvu11g0340 570 SUPERFAMILY Galactose-binding domain-like 40 171 IPR008979 -
Pvu11g0340 570 SMART glyco_10 253 504 IPR001000 GO:0004553|GO:0005975
Pvu11g0340 570 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 209 504 IPR001000 GO:0004553|GO:0005975
Pvu11g0340 570 Pfam Glycosyl hydrolase family 10 219 475 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0340 Pvu-Chr11 2871434 2875629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0340 14 563 Glycoside Hydrolase AT4G33840 55.696 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0340 - - gmx:100775272 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0340 11 2871434 2875629 Pvu11g0340 11 2871434 2875629 ECH