Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0338 ATGGCAGCAGAGTCAAACGCTGGGTTTCACTGTGAAGATATAGATTCTGTTTTGAACAGGCGTGCCATATCATTTCAGCCTGGAGGTGCTATTAACCGCCTGTCAGAGATGGTTCCAATGGGTAATTATTTTGGGCTAAGTAGTTCATCTGGGATGATATATTCTGGGAATTCAACCATCATTAACAGTAATCCTGTCATGAGTCAAGCGGGTAACCCATCAAGTTCTTCGCTTCTTCTCGATTCGGTTCCAGGACTGAAGCATGACACAGGGTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGATTGGAGGAGGGCCTTGCCAGATATGCTGAAGAACCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCTGATAAAACTGTTCGAGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGAAGGAAATCAGAAGAACACAATCTGGGAAAGAAGGTCCATAACAGAAAGGATAAGCCTGTGGAGTTAGCATCAAAGACAAATTTACATTCGGCTCTGCCCCCGAGCATGGCTACGTATTCTCTCATGTCACACCATATGGACCAAAGTCAACGGATACAATATGATGGTATTTGTAGTCCTTTGAAGCAACTCATGCAGCAGAATGCTCAAGCTTTTAATCAAATCAGTGCTAATTTGTCTACTTACAAGTTGCAGGATAACATCGACCTCTTTTGCCACACTAGGCATAATATTAATACCATTCTTAACGATATGAGAGGGATGCCTGGGATTATGAGCCAAATGCCACCACTGCCTGTGGCCATTAATGAGGATCTTGCTAGTAGTATTTTGCCTAATAGAACATAG 846 0.4291 MAAESNAGFHCEDIDSVLNRRAISFQPGGAINRLSEMVPMGNYFGLSSSSGMIYSGNSTIINSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLARYAEEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHNLGKKVHNRKDKPVELASKTNLHSALPPSMATYSLMSHHMDQSQRIQYDGICSPLKQLMQQNAQAFNQISANLSTYKLQDNIDLFCHTRHNINTILNDMRGMPGIMSQMPPLPVAINEDLASSILPNRT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0338 281 MobiDBLite consensus disorder prediction 149 169 - -
Pvu11g0338 281 Gene3D - 92 154 - -
Pvu11g0338 281 MobiDBLite consensus disorder prediction 149 173 - -
Pvu11g0338 281 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 1 281 - -
Pvu11g0338 281 Pfam Protein of unknown function (DUF3755) 227 260 IPR022228 -
Pvu11g0338 281 SUPERFAMILY Homeodomain-like 84 151 IPR009057 -
Pvu11g0338 281 CDD SANT 95 140 IPR001005 -
Pvu11g0338 281 PANTHER TRANSCRIPTION FACTOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0338 Pvu-Chr11 2844814 2851713 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0338 - - gmx:100807371 514.227