Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0325 ATGATTCTGCAACACGCTTCTTCCATCTCACACTTCTCTTCACTCTCCCCTTCTCTCTGTCCATGTAACGCCGCATTTCCTTTCTCCAGAAGAACCAGAAAGCGTTTATTCGCTAATTCCGGTTCCCGCAAATTCCGAAGAAAACGCACCGTTCGCTTCTGCGCTCTTCCCTCGGACGTTTCCAACCAAAACTGGAATTCCGAATTCGCCAGTTCCGCGCGGAGGACCGCCACCACCTTCGTTCTCAAACGAATTTCCAATCAACTCCACGCCGACGACAACAGCACTAGCAACGATGTTGCTGATATCGAGCTGCACGATTCAGCTTCACCGTCGTCGTTGTCGTCTCCGCCGTCTTCGGTTCAATTAGGTTCGAACTTCACCGGTTTCCGCGAGGATCCTATTGTGGATAAGCTGCGGACGCAGCTTGGGGTCATTCACCCGATTCCATCGCCTCCGATAAACCGCAACGTGGTCGGCCTGTTCGTGTTCTTCTTCTTTGTCGGCGTTGTGTTCGATAAACTGTGGACTTCGCGGCGGCGGAGCAAGAGCGGCGGAGAGGACGGGCTGCGTGGCGTGTGGCCGCAGGTGCCGACGAGCTTCTCGCTGTTCCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGTTGGGGAAGTTGTGGAAGGTGTATAGAGGTGGAATTGAGAACTGGATTATAGGGTTGCTTCAGCCTGTGATTGATAATTTGAAGAAGCCTGATTACGTTGAGAGGGTTGAGATTAAGCAGTTCTCGTTAGGAGATGAGCCGTTGTCTGTTAGGAATGTTGAGCGCAGGACTTCTCGCAGAGTCAACGATTTGCAGTACCAGATAGGCCTTAGGTACACAGGTGGTGCTCGCATGCTGTTGATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTCGTGCCTGTTGGTGTTCGAGACTTTGACATCGATGGCGAACTTTGGGTAAAATTAAGACTAATACCAACAGAACCATGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCCAAGATCAAGTTTGAACTATCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCGATGTTTTTAACTAAACTTCTCACTGAAGATTTACCCAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTTCAAAAAGGAAAAGCTGTTGGTCCAGTTGCTGGTGATGTTAAATCTGGAGAAATGCAAGGAAATAAAGATTCTGTGGGTGAACTATCTGTTACTTTGGTGGATGCTCGAAAGCTTTCTTATATTTTCTATGGCAAGACAGATCCTTATGTTGTTCTTGGCCTTGGTAATCAAGTTATACGCAGCAAAAAGAACAGTCAAACCACTGTAATTGGACCCCCAGGAATGCCAATTTGGAATCAGGATTTTCACATGCTTGTTTCCAACCCTAGAAAACAAAAGTTATCCATCCAAGTAAAGGACGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGACAAAATTGTGGTTTTACAAGGAGGTTGGGGGTTTTTAGGAAAGCGCTCTTGTGGCGAGATATTGCTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGATAAAACTGAGATGGACTCTATTTATACTGATGTTTCTGATGACGAGTTGTCTGATTCAGAAGTAAATGTCACTGACGAGAGGGATGAAAGAAACTCTGTGTATGAAATAGATAAAGAGTCATTTATGGATGTTTTGGCAGCATTAATCGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGTGTTGGGCAAAGTTTTGGATAATGGCTCAAATGCTGGATCTAAAGTGTCAAAGTCTTCGATTCCCAATGCTGAACCAATCCCTTCTAGTTCTGATAATTCTGTAGGCTCTGCTGGAGGCTCAGCCTTAGTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAATCTCTTCAATCCTTAA 2070 0.4527 MILQHASSISHFSSLSPSLCPCNAAFPFSRRTRKRLFANSGSRKFRRKRTVRFCALPSDVSNQNWNSEFASSARRTATTFVLKRISNQLHADDNSTSNDVADIELHDSASPSSLSSPPSSVQLGSNFTGFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRSKSGGEDGLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVAGDVKSGEMQGNKDSVGELSVTLVDARKLSYIFYGKTDPYVVLGLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLSIQVKDALGFADLTIGTGEVDLGSLKDTVPTDKIVVLQGGWGFLGKRSCGEILLRLTYKAYVEDEEDDKTEMDSIYTDVSDDELSDSEVNVTDERDERNSVYEIDKESFMDVLAALIVSEEFQGIVASETVLGKVLDNGSNAGSKVSKSSIPNAEPIPSSSDNSVGSAGGSALVWLAVITSISLLIALNVGGSNLFNP* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0325 689 MobiDBLite consensus disorder prediction 632 656 - -
Pvu11g0325 689 SMART C2_3c 424 525 IPR000008 -
Pvu11g0325 689 ProSiteProfiles C2 domain profile. 411 526 IPR000008 -
Pvu11g0325 689 Pfam C2 domain 423 521 IPR000008 -
Pvu11g0325 689 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 211 398 IPR031468 GO:0008289
Pvu11g0325 689 CDD C2 425 519 - -
Pvu11g0325 689 Gene3D C2 domain 405 552 IPR035892 -
Pvu11g0325 689 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 423 552 IPR035892 -
Pvu11g0325 689 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 26 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0325 Pvu-Chr11 2740739 2749392 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0325 - - gmx:100817508 1107.05