Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0319 ATGGCAAAAGAGGGAAACGACATTGATGAAGTAAACGACGCCGTCCATGGCACGGGGGAACAAGAAGAAGAGGAAGAACACGCTCCGCAGGAGGAAGATGACAATGACATGGAAGAAGAGGATGAGTATACTTTCAGGTTCCAAAACGGGATGGATCCTTTGGACTTCATCGATAACAATGACGATTCTGGTCTTCAACCCTACGAGCGATTCGAACGTCTCGAACAGGAAGCTCTTGCCGATAAAAAGCGAAAAGCAACTGAATGCCACAGTGAAGAGCCACCTTCTAAGATGATTAGGGAAAGTGATATTTCCGGGTCAAAGATAGCTGAGATAATGGAAGCAATGAATTATCATGGTGTGCGCAAGAGATCAAGAAAGCCCAAAAAGAGAGGCAGGCGAAAAGGATCAAAGAATAAAATGGACCCTAGGCTAACACGGATGCTGGGTGATGCCACACTTCACTATGCATGTGGCCATTATGACAAGGCTAAAGCTGTGTTGCTTGAAGTTATTAAGTTGGCACCGAATTTGCCTGATTCTTATCACACCCTTGGACTTGTCTGCAGCTCACTCCAGGATTATAAAAGAGCTATGAGTTTTTACCTAATAGCCGCTCATTTGACTCCAAAAGATTCATCTCTTTGGAAAAGGATTTTTACCTGGTCCATAGAACAAGGTTATATTGATCAAGCCCGGCATTGTCTTTTAAGAGCAATAACAGCAGATCCCCAAGATGTTACTCTTAGAGGTCTTCTTGCAAGGCTTTATGTTGAACTTGGAGACTATCAAAAGGCTGCTGTTACATATGAGCAAGTACATCAACTCTGTTATGAGAATGTTGATCCACTGAAAGCTGCAGCTAAGTTGTACAAAAAATGTGGTCAAGTTGAACACGCTGTTCGTATTCTTGAAGACTATCTTAAGAGTCAACCTGACGGAGCAAATGCGAGTGTAGTTGATCTGCTGTGTACCATATTGATGGAAACTAAGGCGCATGACAGAGCTCTGCAGTATATTGAACATGCTCAAGCTGTAAATGCATGGAAAGAATTGCCATTGAATTTGAAAATTAAGGCTGGAATTTGCCATGCTCATCTTGGAAAAATGGATATGGCTCAGGTTCTCTTTAATGATTTGAAACCAGAGAATGCAAGCAAGCACGTTGACTTGGTCATTGAGGTTGCTGACTCATTAATGGGTCTCGAACATTATAACCATGCATTGAATTATTATTTGATGTTGCAAGGAAATATTGGAAAGGAAGATGGTCCTCTATATCTGAAACTTGCTAAATGTTACATGTCCTTGAAAGAAAGTTCTCAAGCAATTATTTTTTTTTACAAAGCCCTTGAAATACTACAAGATGAGGTTGATGCACGCATAGCTCTAGCTTCCCTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCAATTTCCTTGTTGTCTCCTCCAAATGATTCTGACTCTGGTGAAGTACATTCTGAAAAGGCAAATAGATGGTGGGTTGATATAAGAATAAAACTGAAGCTCTGCAACATTTATTGGAATAGAGGGACACTTGGTGATTTTGTGGATACAATTTTCCCTTTGATTCGTGAATCATTATATGTTGCAACTCTTCGACAGAAGGGTAAATCAAAAAAGCGACTCACCAAAAGAGATCTGGTCGAAAGGGTTAGGATACTAGATGGTCCAGAAAAGGATAATGTATTTCGAGGATTCAGGCCAGTAGCTGCAGCATCTGATCGGTTGAAAGCTTCCAGGGCAAAAAAGTTGCTGCAGAAGATGGCAATTGAAAAGGAGAAAAGAAAAGCTGAGGCACTGGCCTCCGGAATTGATTGGCTAAGTGATGATTCAGATGATGAGCCTCAGGAAGAAAACAGAGAACCTCCCTTGTGCAATCTTCTCAAGAATGAAGAACATCACCAGCTAATAATCGATTTGTGCAAGGCCTTAGCATCCTTACAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTCTCTAAGATTGGCTGGTACATCTCTGTCTACTGACAAGAAAGAGGAACTTCGATCTCTTGGAGCTCAAATGGCATACAGCACAACGGATCCTAAACATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTGCAGCTTGGAATTGCTACTACAAGGTTATCTCAAGATTGGAAAACCGAGATACAAGACATTATAAATTTGTACGTGTTATGCAAGGAAAGTTTGTGGACTGTGTGCCTCCTATTCTAATTTCTGGGCATCAATTTACCATATTTAGCCATCATCAAGATGCAGCAAGGAAATACCTTGAAGCTTACAAATTATTGCCAGAGAATCCCTTGGTTAATCTCTGCGTTGGAACAGCCTTGATCAACTTAGCATTGGGTTTCAGACTTCAAAACAAGCATCAATGTCTTGTACAAGGTTTAGCATTCCTCTACAATAACCTGAGAATCTGCGAGAACAGTCAGGAATCCTTGTACAACATAGCTCGGGCCTATCATCATGTTGGGCTTGTAACTCTGGCGGCAGTCTATTATGAGAAAGTGATTGGTATTGGCGAGAAAGACTATCCAATTCCAAAACTTCCCAATGAGAATCCAGATGTCATAGAAAATCATAAACCTGGTTACTGCGATCTTCGCAGGGAGGCAGCTTACAATTTGCATTTAATCTACAAAAAAAGTGGTGCTATTGATCTTGCTAGGCAACTTCTTAGAGATCATTGTACCTTGTGA 2754 0.4096 MAKEGNDIDEVNDAVHGTGEQEEEEEHAPQEEDDNDMEEEDEYTFRFQNGMDPLDFIDNNDDSGLQPYERFERLEQEALADKKRKATECHSEEPPSKMIRESDISGSKIAEIMEAMNYHGVRKRSRKPKKRGRRKGSKNKMDPRLTRMLGDATLHYACGHYDKAKAVLLEVIKLAPNLPDSYHTLGLVCSSLQDYKRAMSFYLIAAHLTPKDSSLWKRIFTWSIEQGYIDQARHCLLRAITADPQDVTLRGLLARLYVELGDYQKAAVTYEQVHQLCYENVDPLKAAAKLYKKCGQVEHAVRILEDYLKSQPDGANASVVDLLCTILMETKAHDRALQYIEHAQAVNAWKELPLNLKIKAGICHAHLGKMDMAQVLFNDLKPENASKHVDLVIEVADSLMGLEHYNHALNYYLMLQGNIGKEDGPLYLKLAKCYMSLKESSQAIIFFYKALEILQDEVDARIALASLLLEEGKEDEAISLLSPPNDSDSGEVHSEKANRWWVDIRIKLKLCNIYWNRGTLGDFVDTIFPLIRESLYVATLRQKGKSKKRLTKRDLVERVRILDGPEKDNVFRGFRPVAAASDRLKASRAKKLLQKMAIEKEKRKAEALASGIDWLSDDSDDEPQEENREPPLCNLLKNEEHHQLIIDLCKALASLQRYWEALEIINLSLRLAGTSLSTDKKEELRSLGAQMAYSTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRVMQGKFVDCVPPILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGLAFLYNNLRICENSQESLYNIARAYHHVGLVTLAAVYYEKVIGIGEKDYPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGAIDLARQLLRDHCTL* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0319 917 SUPERFAMILY TPR-like 758 912 IPR011990 GO:0005515
Pvu11g0319 917 MobiDBLite consensus disorder prediction 1 99 - -
Pvu11g0319 917 MobiDBLite consensus disorder prediction 65 99 - -
Pvu11g0319 917 Pfam Tetratricopeptide repeat 225 272 - -
Pvu11g0319 917 Pfam Tetratricopeptide repeat 152 212 - -
Pvu11g0319 917 SUPERFAMILY TPR-like 361 479 IPR011990 GO:0005515
Pvu11g0319 917 Gene3D Tetratricopeptide repeat domain 137 351 IPR011990 GO:0005515
Pvu11g0319 917 Gene3D Tetratricopeptide repeat domain 352 520 IPR011990 GO:0005515
Pvu11g0319 917 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 21 916 IPR039340 GO:0006383
Pvu11g0319 917 MobiDBLite consensus disorder prediction 1 23 - -
Pvu11g0319 917 ProSiteProfiles TPR repeat profile. 179 212 IPR019734 GO:0005515
Pvu11g0319 917 Gene3D Tetratricopeptide repeat domain 578 916 IPR011990 GO:0005515
Pvu11g0319 917 SMART tpr_5 145 178 IPR019734 GO:0005515
Pvu11g0319 917 SMART tpr_5 829 862 IPR019734 GO:0005515
Pvu11g0319 917 SMART tpr_5 179 212 IPR019734 GO:0005515
Pvu11g0319 917 SMART tpr_5 642 675 IPR019734 GO:0005515
Pvu11g0319 917 SMART tpr_5 247 280 IPR019734 GO:0005515
Pvu11g0319 917 SMART tpr_5 424 457 IPR019734 GO:0005515
Pvu11g0319 917 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
Pvu11g0319 917 MobiDBLite consensus disorder prediction 122 138 - -
Pvu11g0319 917 MobiDBLite consensus disorder prediction 24 41 - -
Pvu11g0319 917 Pfam Tetratricopeptide repeat 425 453 IPR019734 GO:0005515
Pvu11g0319 917 SUPERFAMILY TPR-like 152 327 IPR011990 GO:0005515
Pvu11g0319 917 MobiDBLite consensus disorder prediction 117 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0319 K15201 - gmx:100804533 1563.13