Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0318 ATGATTGCATTGGCGCGAAAGCTCTCCCCTTCAAAGCTTAAACCAATCTTTTATCTATCGTTCCTTTGTGAATGCAGAAACCATTCCCACTCAAATACCTTTTCGACCGTAATACCGTACTCAAAGCCCCATCTTCAGAACTCCACAAAATTTTCACCTCGGCCATGGGTTAACTTGTTTAGGTTTTGCTCTTCACAGCCAACAGATTCAGCTACAAAACAGAATTTGCCCCTCTGTCGAGAAGGTAATTATGATGAAGCCAATTCCCAATCTCTTCGTGTTTGCCCTGGCTGTGGGGTTTATATGCAAGATTCTAACCCGAAACACCCTGGTTATTTTATCAAACCCTCCGAGAAGGACTTCAATTATAGACTGTATAACAATCTTGAACCCGTTGCACAAGAGCCTGAATTTTCTAACTCTGTTAAAAGGGGGTTTGTTATTGAACCAGAAAAGCTTAAGGATGATGATGTAGGCTTGATTAAGAAACCAGAGAAGCCTGTGGTCTGTGCACGCTGTCATTCGTTAAGGCACTATGGAAAGGTGAAGGATCCTACCGTGGAAAACTTGCTACCTGATTTTGACTTTGATCACACTGTGGGTAGGAAGTTGGCATCAATAAGTGGGACCCGGTCTGTTGTGCTGATGGTTGTGGATGTTGTGGATTTTGAGGGGTCGTTTCCTAGGAAGGTTGCAAAGTTGGTTTCTAAGACAATTGAGGACCATTCTGCTGCATGGAAGCAGGGTAAGTCAGGGAATGTTCCTAGAGTGGTGCTTGTGGTGACAAAGATAGACTTGTTGCCTAGCTCATTGTCACCAACAAGGTTGGAGCATTGGATTAGGCAGAGAGCAAGAGATGGTGGTATTAATAAGATTACTAGTTTGCACATGGTGAGTGCCCTGAGGGATTGGGGACTGAAGAATCTTGTGGATAATGTAGTTGATCTAGCTGGACCTAGAGGTAACGTGTGGGCTGTTGGGGCACAGAATGCAGGGAAGAGTACTTTGATAAACTCTATAGGGAAGTATGCTGGAGGAAAGATTACACATCTGACTGAAGCACCTGTGCCAGGAACTACACTAGGCATTGTTAGAGTGGAGGGTGTCCTTCCAAGTCAAGCAAAACTGTTTGATACACCCGGCCTTCTTCATCCTTACCAGATTACAACGAGGTTGATGAGGGATGAGCAAAAGCTTGTTCATATAGGAAAGGAATTGAAACCAAGGACATACAGAATTAAGGCTGGCCATTCAATTCACATAGCCGGTCTAATGAGATTGGATGTAGAAGAAACTTCCCTGGATTCTGTTTATGTCACAGTGTGGGCTTCTCCTTATCTTCCACTGCATATGGGTAAAATAGAAAATGCATGTAAATTGTTCCAAGATCATTTTGGCCACCAGTTACAGCCACCAATTGGAGACAAACGAGTTCAAGAACTGGGGAACTGGGTGAGAACGGAATTCCATGTTAGTGGGAACAGTTGGGAGTCGAGTTCAGTAGACGTTGCTGCTGCTGGCCTCGGGTGGTTTGCCATTGGACTTAAAGGAGATGCAGTGTTAGGTGTTTGGACTTATGAAGGAGTTGATGTTGTTCTACGCAATTCTTTAATACCCAATAGATCACATACTTTTGAGGATGCAGGATTTACAGTATCAAAGATTGTCTCCCAGTCCGACCAATCTTTAAACAAGTCAAAGGAACGAAATGACAAAAAGCCAAAGGGAATTGACAAAAGGCCAAAGGGAATTGACGACTCAAAAGTGTCAAACCAGTTTGTTGAATCACCTCTTTTGACTTCTGATGGAGTCATCTAA 1818 0.4345 MIALARKLSPSKLKPIFYLSFLCECRNHSHSNTFSTVIPYSKPHLQNSTKFSPRPWVNLFRFCSSQPTDSATKQNLPLCREGNYDEANSQSLRVCPGCGVYMQDSNPKHPGYFIKPSEKDFNYRLYNNLEPVAQEPEFSNSVKRGFVIEPEKLKDDDVGLIKKPEKPVVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRKLASISGTRSVVLMVVDVVDFEGSFPRKVAKLVSKTIEDHSAAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRARDGGINKITSLHMVSALRDWGLKNLVDNVVDLAGPRGNVWAVGAQNAGKSTLINSIGKYAGGKITHLTEAPVPGTTLGIVRVEGVLPSQAKLFDTPGLLHPYQITTRLMRDEQKLVHIGKELKPRTYRIKAGHSIHIAGLMRLDVEETSLDSVYVTVWASPYLPLHMGKIENACKLFQDHFGHQLQPPIGDKRVQELGNWVRTEFHVSGNSWESSSVDVAAAGLGWFAIGLKGDAVLGVWTYEGVDVVLRNSLIPNRSHTFEDAGFTVSKIVSQSDQSLNKSKERNDKKPKGIDKRPKGIDDSKVSNQFVESPLLTSDGVI* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0318 605 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 163 576 - -
Pvu11g0318 605 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 71 132 - -
Pvu11g0318 605 Pfam 50S ribosome-binding GTPase 323 388 IPR006073 GO:0005525
Pvu11g0318 605 CDD YqeH 170 382 - -
Pvu11g0318 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 387 IPR027417 -
Pvu11g0318 605 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 71 132 - -
Pvu11g0318 605 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 163 576 - -
Pvu11g0318 605 MobiDBLite consensus disorder prediction 564 586 - -
Pvu11g0318 605 MobiDBLite consensus disorder prediction 561 591 - -
Pvu11g0318 605 Gene3D - 201 386 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0318 Pvu-Chr11 2641918 2646017 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0318 - - pvu:PHAVU_011G030900g 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0318 11 2641918 2646017 Pvu11g0318 11 2641918 2646017 ECH