Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0311 ATGAAGAACCTGAACATCTCTTTGTGCGTGCTTCTCATGGCTCTTGTGCGATTAGGGGGGAGTGCACCCTCAAGCTTCAACTATGGTGATGCCCTTGACAAGAGTTTGTTGTTCTTTGAAGCACAGAGATCTGGTAAGCTACCACTGCAGCAGCAGCGAGTCAAATGGCGTGGTGATTCTGGCCTTAAAGATGGTTTTCAGCAAGGAGTAGACCTGGTTGGAGGGTACTATGATGCTGGAGACCATGTGAAGTTTGGGCTGCCAATGGCCTACAGTGTCACAATGCTTGCATGGGGAGCCATTGAGTTCAACAAGGAAATTACGAACTTGAACCAAATGGGACATGCTTTATGGGCCATTAAATGGGGAACTGATTACTTTGTCAAAGCACACACACAACCCAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGATCATTACTGCTGGGAGCGTGCTGAAGACATGACTACATCAAGAGGTGCCTATAAAATTGATGAACAACACCCTGGCTCTGATCTGGCAGGTGAAACTGCAGCTGCGTTGGCTGCTTCAGCTATGGCTTTCAGGCCCTACAACTCTTCTTACTCTGATCTCCTCCTAGTTCATGCAAAACAGCTCTTCACATTCGCAGATAGGTTCAGAGGTCTCTATGATGACTCCATTTCAAGTGCTCAGCAATTCTATACTTCTTCCGGTTACTCAGATGAATTGTTATGGGCTGCCACTTGGCTACACCTTGCAACTGGAGATGAATACTACCTAAAGTATGTAGTGGACAATGGCGTGTATATGGGTGGAACTGGCTGGGCAATGAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTTCAGATCCTCCTAACAAAGATATTACTAGAAGGGAAGGCTGGTTCTTATGCTGATACACTAAAGCAATACCAGGCCAAGGCAGATTATTTTTCATGTGCCTGCTTGCAAAAGAACGATGGTTACAATGTTCAGAAAACACCAGGTGGCTTACTATACGTGCGTGAATGGAACAACATGCAGTATGTTTCTTCTGCTACATTCCTTTTAGCTGTTTACTCTAATTACCTCTCAGCAACAAAAGTAAATCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTCCTCAACTTTGTGAAGTCTCAGGCTGATTATATCCTTGGTAATAACCCAGCGGGTATGAGCTACTTGGTTGGATATGGAGCAAAATATCCTCTTCATGTTCACCACAGAGGCGCTTCTGTTGCTTCAATCTTTACTCTTCACAGTGAGGTTGGCTGCGCTCAAGGATTTGAGCTGTGGTATAACCGTGCTGAGCCAAATCCTAATGTCATCGATGGTGCCCTCGTGGGTGGTCCCGATAAAAATGATGGCTTCTCTGATGACAGATCCAACTATGAACAAACTGAGCCTACACTTTCAGGTTCTGCTCCTCTTGTGGGCATCTTTGCTAAACTGCAGAGTTTGTGTGGTAATGCAGGTGCAGGTTACAACCATGATGAATCACCAAAGCCCCAGCAAAAAACACCAAGTTACAACAACCATTATGAATCACCAGTACCAGTGACCCAAGAAAAAACACAAAGTTACGACCAAAATGAATCACCAGTGCCCCAACAAAAAACACCGAGTACATACACAGTAAAAGAAACGGCATCTAAAACATCAGAAGGTGCCCCATTGCAATTTCTTCACTCAATAAGTAGCTCATGGACTGTTGGAGGTGCAACCTACTACCGCCACAGGGTCATAATCAAGAATACTTCTTCGAAGCCAATCTCAGATCTTAAGTTGGTGGTTAAGGACCTCTCAGGCTCTTTATGGGGTCTCTCTCCAACAGAGGAAAAGGACACCTATGAACTTCCCCAATGGCAGAAGGTCTTGAATCCTGGCTCCGAGTGCATATTTGTATATGTTCAAGGCGGACCCCAGGCTGAAGTCTCCATCAAAAGCTTCCAATGA 1977 0.4527 MKNLNISLCVLLMALVRLGGSAPSSFNYGDALDKSLLFFEAQRSGKLPLQQQRVKWRGDSGLKDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFNKEITNLNQMGHALWAIKWGTDYFVKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEQHPGSDLAGETAAALAASAMAFRPYNSSYSDLLLVHAKQLFTFADRFRGLYDDSISSAQQFYTSSGYSDELLWAATWLHLATGDEYYLKYVVDNGVYMGGTGWAMKEFSWDNKYAGVQILLTKILLEGKAGSYADTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYVREWNNMQYVSSATFLLAVYSNYLSATKVNLNCPDGQTQPQELLNFVKSQADYILGNNPAGMSYLVGYGAKYPLHVHHRGASVASIFTLHSEVGCAQGFELWYNRAEPNPNVIDGALVGGPDKNDGFSDDRSNYEQTEPTLSGSAPLVGIFAKLQSLCGNAGAGYNHDESPKPQQKTPSYNNHYESPVPVTQEKTQSYDQNESPVPQQKTPSTYTVKETASKTSEGAPLQFLHSISSSWTVGGATYYRHRVIIKNTSSKPISDLKLVVKDLSGSLWGLSPTEEKDTYELPQWQKVLNPGSECIFVYVQGGPQAEVSIKSFQ* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0311 658 PANTHER ENDOGLUCANASE 5 9 613 - -
Pvu11g0311 658 MobiDBLite consensus disorder prediction 450 478 - -
Pvu11g0311 658 Pfam Glycosyl hydrolase family 9 28 487 IPR001701 GO:0004553|GO:0005975
Pvu11g0311 658 Gene3D - 24 495 IPR012341 GO:0005975
Pvu11g0311 658 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Pvu11g0311 658 PANTHER ENDO-1,4-BETA-GLUCANASE 9 613 - -
Pvu11g0311 658 MobiDBLite consensus disorder prediction 507 557 - -
Pvu11g0311 658 SUPERFAMILY Six-hairpin glycosidases 25 497 IPR008928 GO:0005975
Pvu11g0311 658 MobiDBLite consensus disorder prediction 500 557 - -
Pvu11g0311 658 SMART CBM49_2 566 646 IPR019028 GO:0030246
Pvu11g0311 658 Pfam Carbohydrate binding domain CBM49 567 645 IPR019028 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0311 Pvu-Chr11 2554248 2559235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0311 26 657 Glycoside Hydrolase AT1G48930 65.823 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0311 K01179 - gmx:100812170 1131.7