Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0307 ATGGTAGAGGGAGAAGTGTCAATGTTTGATGAGACAACGGTAAGAGCTCAAAGAGCTGCAAGGGGTGGAAACTGGAGAATGTTCAAGAAAATTTTGGAGGGAGACAAGAAGAGTTTGGTGGGGGCTTTTGACTTGTTTGGGAACACTGCCATTCACATTGCAACACGTTCCAACAATCCAGGGCTTCTTCGTGAGTTGTTGGAAATGCTGAGTGAGGAAGAGAGGTGGCATGCATTGAGGAAGGGGAATTGTGTGAATAACACCCTTCTGCATGAGATCGTGTTCTGTACTAGGGTGGAGATGGCTGGTGTTGTGTTGGAGTTTGAGAATGAAGCAGCACCAGAAGAAGTAGCAGAAGAAAAGAAAAGGGTTCCTTTGGTGGAGATCGTGAATGACTCAGGTGAAACCCCTCTCTTTAGGGCTGCCAAGCTTGGCAGGCTTAAGATGCTCAAGTATATGGCCAAACATGCTCATGGTGACATCAGAAGGCTTTTTGTTAGATATGACAAACATTCCATTCTTCATGCAAGCATTCTTGGACAGTTTTTTGATGTGAGTATTTGGTTGTTGAATATGGATGAGAAGCTAGCTCAACACAAGGATATGAATGGAATGACATGTCTTCAACTTCTATCCAATATGCCACTTGTATTTCGGAGTCAAACACCTTCCATGGGAACATTGAAGACTCTTATATATTACTTGCTTCCTGAGGAAGGATATGGAAGCCATGATGATGGTGAAAATGCCAGTGCTGACTTCAGACATCAGAGGAGCGATATAGAAAGTGGCCAACAAGATAAGGCCAAGTTTCCTAGTTCAGTTCTTTCAAGGATCAACCATGCTATTTGGAGAACTCTGGCAAAAGAGTTCGATGGGATTGGACGTATATGGAAACTAAAGAAGCAGCATAAGCTAGCAGAGCATCTGTCTGAGATGTTAGTGCAGAGAGACTTTTCATGGCAGAATTCGTTTCACGAAAACTTTCAACCCTTGATTGTACTGCCAGTTCTTTCCTCCAAATCAGACAGGATCAAACACATTCACCACATGAAGGAGATGCACAAGACCAATAGTGAAATGTCGCGTTCTAGAAGTTACAGAGCCATAACCACCTCAACAAGCATTCCCCATTCCAAGAACTACACGCCACTTCTCATGGCAGCTGGGTCAGGAATCGTGGAAATCGTTGGGAAAATCATTGACAAGTTTCCCGAGGCCATTTGTCACGTTAGCCAGGATGAACACAACGTTCTGCACATGGCCGTGAAGCACCGGCAGCTCAAGATCTTTAACTTGTTAAAGAAACATTCAGCATTCAAATCATTGACATTCCGGATTACTGCAGAAGGTCGTACTCTCTTGCACCAAATTTCGAGAATGGAGTTTTACGTAGAACAGCACCTACCTGGTGTTGCGTTCCAACTCCAAGACGAGTTGCGCTGGTACGAACGAGTGAAGGAGATTGTTCCAGCATACTACCTGATGCACTGTGACAAAGACGGGCTAACAGCTGAAGATGTTTTGGAAATGGAGCACCGGGAGATGCACAAAGAAGCAAAAGGGTGGATTAAGGAAACGGCGCAGTCATGCTCAACCGTGTCTGTCCTTGTTGCCACGGTGGTCTTTGCGGCGGCCTACACCATCCCGGGCGGCACAAATCAGAACAACGGCACGCCTGTGTTTCTCGGTTCTCGCGTGTTTCTCTTCTTCACTGTGACGGATGTTGTCGCACTGGTGAGCTCGCTGGCATCGGTGGTGATGTTTCTCTCAATCCTAACATCCCCTTTTGAGCTGTGGGATTTCCGAAGGTCTCTGCCGCAAAAACTGAGCTTAGGGTTTGCTTCTCTCTTCTTCTCGCTGGTGTGCACCATGCTGACGTTCAGTGCAACCGTTTTGCTCACCATTCAGTTGGAGAACCACCAGAAATGGGCTTCCGTTTTGTTTTGCTGCGGCGTGTTCTTTCCTGTGGCCATTTTTTGGCGAATGCAATTTCCGCTTTACAAGATGCTTCAGCGTCTCGCTAAGCGCCTGTTGAAGACGCTTAGAGAAGCAGTGCCAACTACGTTTGTCAAATATTCCAGGAAAAGGGCTCGGACAAGAAACTATAACATCATCACTGAGTAG 2127 0.4612 MVEGEVSMFDETTVRAQRAARGGNWRMFKKILEGDKKSLVGAFDLFGNTAIHIATRSNNPGLLRELLEMLSEEERWHALRKGNCVNNTLLHEIVFCTRVEMAGVVLEFENEAAPEEVAEEKKRVPLVEIVNDSGETPLFRAAKLGRLKMLKYMAKHAHGDIRRLFVRYDKHSILHASILGQFFDVSIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQTPSMGTLKTLIYYLLPEEGYGSHDDGENASADFRHQRSDIESGQQDKAKFPSSVLSRINHAIWRTLAKEFDGIGRIWKLKKQHKLAEHLSEMLVQRDFSWQNSFHENFQPLIVLPVLSSKSDRIKHIHHMKEMHKTNSEMSRSRSYRAITTSTSIPHSKNYTPLLMAAGSGIVEIVGKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNLLKKHSAFKSLTFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKEIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVSVLVATVVFAAAYTIPGGTNQNNGTPVFLGSRVFLFFTVTDVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFASLFFSLVCTMLTFSATVLLTIQLENHQKWASVLFCCGVFFPVAIFWRMQFPLYKMLQRLAKRLLKTLREAVPTTFVKYSRKRARTRNYNIITE* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0307 708 Gene3D - 10 234 IPR036770 -
Pvu11g0307 708 SMART ANK_2a 380 411 IPR002110 GO:0005515
Pvu11g0307 708 SMART ANK_2a 46 75 IPR002110 GO:0005515
Pvu11g0307 708 SMART ANK_2a 133 163 IPR002110 GO:0005515
Pvu11g0307 708 SMART ANK_2a 414 445 IPR002110 GO:0005515
Pvu11g0307 708 SUPERFAMILY Ankyrin repeat 18 210 IPR036770 -
Pvu11g0307 708 PANTHER CASKIN 39 682 - -
Pvu11g0307 708 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 39 682 - -
Pvu11g0307 708 Gene3D - 347 475 IPR036770 -
Pvu11g0307 708 Pfam Domain of unknown function 522 633 IPR026961 -
Pvu11g0307 708 SUPERFAMILY Ankyrin repeat 373 458 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0307 Pvu-Chr11 2531149 2534210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0307 376 669 Miscellaneous Gene Families AT3G12360 23.460 1.04e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0307 - - vun:114169248 1223.38