Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0306 ATGGCCACTCTGCAATTCACCTTCACCGATTCAACCTCCTTGTTCAGGCCTTCTCTACCTTCTTCCAGAACCTTCCCTCGGAATCGAAGCCTCGTTGTCAAAGCCTCTTCTTCTTCCTCTTCTTCCGACGACATTTCCCGGAGCAGGAGACGCTTCCTCGCCGAGACCACCGCAATCTCGGTTTCGCTTCCTCACTTGGCGGCCAGGGCCGAAGACACGCTTTCAGAGTGGGAGAGAGTGTACCTCCCTATCGACCCCGGCGTCGTGCTTCTCGACATCTCTTTTGTCCCCGACGACCCCAACCACGGATTTCTTCTCGGGACGAGGCAAACAATTCTGGAGACGAAGGACGGAGGAAACACTTGGGCTCCACGTTCGATTCCCTCTGCCGAGGACGAAGATTTCAACTATCGCTTTAATTCCATCAGTTTCAAGGGGAGGGAAGGGTGGATAGTTGGAAAGCCTGCGATTCTGTTGTACACTGCTGATGCTGGAGATAGCTGGGAGAGGATACCTCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCGACTGGTGAGAAGAGTGCAGAGATGGTGACTGACGAAGGTGCTATATATGTTACTGCTAACAGGGGTTACAACTGGAGAGCTGCTGTTCAGGAAACCGTGTCAGCTACTCTTAACAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGCTATTACACCGGGACTTTCAACACTGTCAATCGCTCTCCAGAGGGAAAGTATGTTGCAGTCTCAAGTCGCGGCAACTTCTACTTAACCTGGGAGCCTGGTCAGCCATACTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATACAGAACATGGGATGGAGAGCTGACGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCAGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGAGGAGGCTTGGGCAGCAGGGGGAAGTGGTATTCTTTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGCGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTCAAGTTTATTGACGACAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1188 0.5034 MATLQFTFTDSTSLFRPSLPSSRTFPRNRSLVVKASSSSSSSDDISRSRRRFLAETTAISVSLPHLAARAEDTLSEWERVYLPIDPGVVLLDISFVPDDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGREGWIVGKPAILLYTADAGDSWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGKYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTEEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0306 395 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 41 395 - -
Pvu11g0306 395 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 76 394 - -
Pvu11g0306 395 PIRSF Photosystem_II_Ycf48-like 39 395 IPR016705 -
Pvu11g0306 395 Pfam Photosynthesis system II assembly factor YCF48 73 393 IPR028203 -
Pvu11g0306 395 Gene3D - 132 368 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0306 - - gmx:100810566 749.969