Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0302 ATGGCTCCCGGGCGTCGACGCGGAGGGAACAAGGCCAAGGCCAATGGCCACTTGAGTTTGGGCGATCTCGTGCTTGCTAAGGTCAAGGGCTTTCCCGCATGGCCTGCTAAGATAAGCAGGCCTGAGGATTGGGAGAAAATCCCTGATCCAAAGAAATATTTTGTTCAATTCTTTGGTACAAAAGAAATTGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAGTGAGGCTAAAAATAAGCTGTCAGCTCGTCTTCATGGCAAGACTAAGCACTTTTCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAGGCTAGTGGTTTGACTGATGACACTGACGATTCTCATATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGTTAACCTTAAGGATGCAATTGACTCTGTGTTATCAAATGCAGAGAAAGATAACATCGATATGGATAATGTTGGTTCTAATCTGGAGCACTGTACACAAAGAGTAGGGGAGAATGACAGCCTAGATGAAAAATACTCTGTATCCGACCATCCAAACGAAAGTTCTTCTGTTTCATCACCAGTGATCAAAAGTAAATTATCCATGGGTTCAGAGCCAAAGAAGAATGCTAACAAATCAAGTCTTAAAGGTGCTAGTAATGTTAATGATTTTGGGCAAGATGATAATAGACACAGTGGTATAACAAATGGGACCAAGCCAAGAAAGCTTGTCAATGGCTTGCGAAAAAGAAGTGAAGCTGCAGGTGATAGAGATAGAAATGGTGGATCATCTACTGGAGTTCTTAAGGAGGGAAATTGTACTGGTCGTGGTGACCTTTCTAGGTCCAGAGAGACAATGAAAGCTGGGAAGAAAAGGAAAACGGCATTTGATGTTAAATTGGATTCTCCAGACACTCTTAAATCAGACAATAATGGTAATACTGGGGAAAAAGATAGCATCATGACAAAAGTCAAAACAAGTCTTGAGGTAAAAAATGAGTTCCCTGAGATCTTGTTTGATTCCAAGGATGCCGATGGTAAAAGTTCTAGTTTGCGGAAGAAGATGCAACTTCATGGAACCTATAATTTAGGGGAAAATGAATCTTTACATGCTACCAAGAAGTTGAAGCGCATGGATACCAATGATGATTCAACTTTGGGATATCCTTCAAAAGTTCTGAAAAGAACTTCGCCGGGTTCTACAGTTATTGAAGACAGACCATTGAAAAAGTCAGAAATGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGTCATCAAGGGGTCAAATTAGTGGTGCGGGTTCTGATGATTCTGTCCATGAGCTGCTGTCGGCGACTAGACATCCGATCCAGGTTCAAAGAGTTATGCCTGATTCTTCAATCATTGCATCTGAGGAAAAGAAAGAAAGGAATTATCTCAGACTGAAAGGTGATACAAGTAATGTTATGATAAAACAAGTAGAGAGGAAACGCAGAGCTGTTTGTCTTTTTGATGATGATGATGACGAACCTAAAACTCCTGTTCATGGAGGAGCTGGAAAGAATGTTAAATCGTCTTCTGTTTCAGAGGTCAAGAAGAGCAACAATGCACACTCTGAAAAGTCTGATGTTCCACTGGCTCAAAGAATTTCTAGTGAGCTGGAGGATACCCATTTGAAGGAGCCACCATCTCAATTACATAATGACAGTTTGTCAATCAAGCTGCCACTAAAAGAGAAAGATAGAGAGAAAGATGACAAAGTGATCCCTGTGCATATTCCTCATAGTCCTGAAAAATTAGATTTGAAGCAGCTTCCCTCCAATGCAGCAAAATTGAGCTCTGTCTCTCCACTAAAATCACCTCAACTGGTACCTGCAAGTAAGTCAAATGCGGAGCGGAATAAAGCTTCCAAACTGTCACTTAAAGTTTCCAGTAATGCTACTCAAAAGAGGGCTGATCATGGGCCTTCAAAGTATTCACATAACTTTAGCTCTTCTCAGAATGAAGTTGCTACACATAAAAAGAAGCTTGCATCGTCGGCGGAAATTTCTAAAACTACACCAGAGACATTGTTTCAGGCAGTTGAAGTTCCTGTTTCAACCATTGGTTTGAAGGATACTGATGCTCTACATGTTGATAGATTGGAAGTAAGCACAGAAGATAAAAGTACTATGAAGCATCTTATTGCTGCTGCCCTGGCGAAAAGGAAACAGGCCCATTCACAATTTATTCCTTCTGGCTTTCCCAATGTTCAGGGGGAAACTCCTAGCCCGTCTACAGTTCAGCCATTTCTGTCTGTCTCGGGCAATTTTTTGCATGCAGATATGCAAGGAGTTTATGAGCAAACATCATTGGTTTCTCCACCAGCTAAAGAACATCATTCTGCTTCTTGGAATCAGCTTGATGCTGATGAAATTGAGGATAGAAGAGTTGATTCAGAGCAAAGGGGTATAGGAGGCTCACTGAGTGGTGGTACCGAGGCTGCTGTTGCCCGGGATGCTTTTGAAGGAATGATTGAGACATTGTCGAGGACCAAGGAAAGTATTGGTCGTGCAACCCGTCTTGCCATTGATTGTGCCAAGTATGGCATTGCCAACGAG 2589 0.4179 MAPGRRRGGNKAKANGHLSLGDLVLAKVKGFPAWPAKISRPEDWEKIPDPKKYFVQFFGTKEIAFVAPADIQAFTSEAKNKLSARLHGKTKHFSQAVKEICAAFDEMQKQKASGLTDDTDDSHIGSEAPSNDGVVVNLKDAIDSVLSNAEKDNIDMDNVGSNLEHCTQRVGENDSLDEKYSVSDHPNESSSVSSPVIKSKLSMGSEPKKNANKSSLKGASNVNDFGQDDNRHSGITNGTKPRKLVNGLRKRSEAAGDRDRNGGSSTGVLKEGNCTGRGDLSRSRETMKAGKKRKTAFDVKLDSPDTLKSDNNGNTGEKDSIMTKVKTSLEVKNEFPEILFDSKDADGKSSSLRKKMQLHGTYNLGENESLHATKKLKRMDTNDDSTLGYPSKVLKRTSPGSTVIEDRPLKKSEMKKSTPNLKTEKSLSSRGQISGAGSDDSVHELLSATRHPIQVQRVMPDSSIIASEEKKERNYLRLKGDTSNVMIKQVERKRRAVCLFDDDDDEPKTPVHGGAGKNVKSSSVSEVKKSNNAHSEKSDVPLAQRISSELEDTHLKEPPSQLHNDSLSIKLPLKEKDREKDDKVIPVHIPHSPEKLDLKQLPSNAAKLSSVSPLKSPQLVPASKSNAERNKASKLSLKVSSNATQKRADHGPSKYSHNFSSSQNEVATHKKKLASSAEISKTTPETLFQAVEVPVSTIGLKDTDALHVDRLEVSTEDKSTMKHLIAAALAKRKQAHSQFIPSGFPNVQGETPSPSTVQPFLSVSGNFLHADMQGVYEQTSLVSPPAKEHHSASWNQLDADEIEDRRVDSEQRGIGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0302 863 MobiDBLite consensus disorder prediction 603 661 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 177 297 - -
Pvu11g0302 863 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 863 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 185 240 - -
Pvu11g0302 863 CDD HDGF_related 18 103 IPR035496 -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 277 297 - -
Pvu11g0302 863 Pfam PWWP domain 21 104 IPR000313 -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 406 420 - -
Pvu11g0302 863 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Pvu11g0302 863 Gene3D - 9 117 - -
Pvu11g0302 863 SMART PWWP_4 18 75 IPR000313 -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 569 595 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 373 439 - -
Pvu11g0302 863 PANTHER PROTEIN HUA2-LIKE 1 1 863 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 501 542 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 421 436 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 112 132 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 554 661 - -
Pvu11g0302 863 MobiDBLite consensus disorder prediction 384 398 - -
Pvu11g0302 863 SUPERFAMILY Tudor/PWWP/MBT 15 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0302 Pvu-Chr11 2498420 2503829 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0302 - - pvu:PHAVU_011G029400g 1670.98