Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0293 ATGGAGATAAATTTGGGAAAACTTGCATTTGATATTGATTTTCATCCGTCAGATTATCTTGTGGCCACGGGTCTAATTGACGGTGACCTCCACCTATATCGTTACAGCCCTGATAGTGTCCCTGTGAGGCAATTGGAAGTTCATGCACACACTGAGTCTTGCAGGGCTGTTCGATTCATCAATGACGTGGTAATGCTGTTTATTTTCGATGTTGTGTATGATTTCTGTTTGGGATACAGAGAACGCTCTTGTTGCAATTCTTTTAATGCCCATGAAGATTACATTTCAGACATGACTTTTGCATCTGATGCTAGGAAACTTTTGACAACAAGGACTCTATCTGTTTGCAATCTTCGAAGAAATACTGTGCAAACTCGATCTGAATTCTCTGAAGATGAGTTGCTGTCTGTTGTTTTAATGAAGGTTGATGAAGATAGAATTATTGGATCAGAGAATGGAATTATCAAAATCATCCAGCCAATAGCCGAACACTCAGATTGTCCTATTGAGTGTCTTGCATTCTCTCATGATAGGAAGTTTCTTGGAAGCATCGCACATGATCAAATGTTAAAGAGCATTAAAAAGAATTTAGAACATATATGGAACAAGAGAAAGAATGCAAATAATGAACAAGCCTTTGGTGGTTCGAACAACTTCTTTGCCGATTTATAG 672 0.3824 MEINLGKLAFDIDFHPSDYLVATGLIDGDLHLYRYSPDSVPVRQLEVHAHTESCRAVRFINDVVMLFIFDVVYDFCLGYRERSCCNSFNAHEDYISDMTFASDARKLLTTRTLSVCNLRRNTVQTRSEFSEDELLSVVLMKVDEDRIIGSENGIIKIIQPIAEHSDCPIECLAFSHDRKFLGSIAHDQMLKSIKKNLEHIWNKRKNANNEQAFGGSNNFFADL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0293 223 Gene3D - 7 218 IPR015943 GO:0005515
Pvu11g0293 223 SUPERFAMILY WD40 repeat-like 10 193 IPR036322 GO:0005515
Pvu11g0293 223 PANTHER WD40 REPEAT PROTEIN 85 157 - -
Pvu11g0293 223 PANTHER WD40 REPEAT PROTEIN 3 67 - -
Pvu11g0293 223 PANTHER WD REPEAT DOMAIN 55 3 67 - -
Pvu11g0293 223 PANTHER WD REPEAT DOMAIN 55 85 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0293 Pvu-Chr11 2339341 2343072 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0293 K24750 - pvu:PHAVU_011G028500g 451.825