Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0290 ATGATCCATCAAGTAAACCAATTGTACTTTGGCTTAATGGAGGTATTAATGAAGGACTTGGTTGCTCCTCAATTGCCTTTGGGGCAGCACAAGAGATTGGTCCACCAGGAAGAGCATATAAAATTTAACAAATTTTCTTGGAATAAAGTTGCCAACATCATATTTTTGGACTCACCTATTGGTGTTGGTTTTTCTTATACTAACAATTCCAAGGACTTAAGTGAGCTTGGTGATGAAGTGTCTGCTTCTGATAACTACAATTTTTTAGTTGGTTGGTTTAAAAAATTTCCAAACTTCAAATCCAACGAATTTTATATTGTAGGAGAGGGTTATGGAGGACATTATGCTCCACAACTTGCTGACCTTATATATGAAAGAAATAAAAGAGGTCCTTACATCAATTTGAAGGGACTCATGATGGGAAATGCTGTGATAAATACGGTTACAGATGCGAAAGGGATATATGATTATGCCTGGAGCCATGGAATAATCTCAACACAAGTTTGGGATGGAATAAAAAGACACTGTAATTTCAGTAAAAAGAGACACACCAAAGAATGCAAAGTTAATATGGTAAAGTTTTTAGAATGTTATACGAATATTGACATTTTAAATATTTACTCACCGTTGTGTCTCGAAGACAAAGATTATGAAATACCAAATTCATCAAGACTTGTTGATGCTTCCCATGGTGTTAGCCAACATGTTCTTTGGAATACATTAACATCATCGGGATACAATTATTGTCTAGATGATCATGTAAGAAAGTATTTCAACAAGAAGAATGTTCAGAGTGCAATCCATGCAAATGTAACTAATCTGCCTTATCCATTTACTGTTTGCAGCGATATAATTGAGAAATGGAATGACTCTCCAGAGACAGTGCTGCCACTAATTCAAAAGTTATTAAATGTTGGTTTACGTATTTGGATGTACAGTGGAGACTATGATGGTAGAGTTCCGATATTATCAACCAAATATAGTTTGGAAGAGTTGAAACTCAATGTAACGAAAGAGTGGAAAGCTTGGTTTGAAGGGGTAGAAGTGGCAGGGTGGGTGGAGGAGTATGAGGGAGGTCTTACTTTTGCCTCTGTTAGAGGTGCTGGCCACCAAGTTCCAATTTCTGCACCACAACCAGCACTTTCTCTCTTCTCCCATTTCCTCTCTTCTCAACCTCTTCCATTTTCTCGCTTCTAG 1197 0.3709 MIHQVNQLYFGLMEVLMKDLVAPQLPLGQHKRLVHQEEHIKFNKFSWNKVANIIFLDSPIGVGFSYTNNSKDLSELGDEVSASDNYNFLVGWFKKFPNFKSNEFYIVGEGYGGHYAPQLADLIYERNKRGPYINLKGLMMGNAVINTVTDAKGIYDYAWSHGIISTQVWDGIKRHCNFSKKRHTKECKVNMVKFLECYTNIDILNIYSPLCLEDKDYEIPNSSRLVDASHGVSQHVLWNTLTSSGYNYCLDDHVRKYFNKKNVQSAIHANVTNLPYPFTVCSDIIEKWNDSPETVLPLIQKLLNVGLRIWMYSGDYDGRVPILSTKYSLEELKLNVTKEWKAWFEGVEVAGWVEEYEGGLTFASVRGAGHQVPISAPQPALSLFSHFLSSQPLPFSRF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0290 398 Gene3D - 249 286 - -
Pvu11g0290 398 SUPERFAMILY alpha/beta-Hydrolases 38 394 IPR029058 -
Pvu11g0290 398 Gene3D - 295 389 - -
Pvu11g0290 398 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 391 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 43 55 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 56 66 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 92 117 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 PRINTS Carboxypeptidase C serine protease (S10) family signature 360 373 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 Gene3D alpha/beta hydrolase 27 212 IPR029058 -
Pvu11g0290 398 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 35 34 391 - -
Pvu11g0290 398 Pfam Serine carboxypeptidase 36 389 IPR001563 GO:0004185|GO:0006508
Pvu11g0290 398 ProSitePatterns Serine carboxypeptidases, histidine active site. 360 377 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0290 Pvu-Chr11 2289009 2298616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0290 306 393 Calmodulin-binding Proteins AT2G22960 31.818 5.13e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0290 K16297 - gmx:100799746 513.842