LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g0286	ATGGCTTTGTCTTCACTTATTTCCAATATTCTTCTTCTGCTTCTTCTCTCTTTCACCAAAGCAGCTTTAGCTGCATCAAAGCTTTCAGTATCTGATCATGATAATTATCTTAGCCGAGAAGTACTTGCAGAACAAGAAGCTGATAGAGTTTATGGATTACCAGGGCAACCACCAGTGAAGTTCAGACAATATGCAGGTTATATCACAGTCAATGAAACTAATGGAAGAGCACTGTTTTATTGGTTCTTTGAGGCCACTCACAAACCACACAAAAAACCTGTTCTCTTATGGCTCAATGGAGGCCCAGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCCCAGGACAGTAGCAAGCCAAAGCTGATGTTGAACCCTTATTCATGGAACAATGCTGCCAATCTTTTGTTTTTGGAAAGCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAAGGATTTGGATGAGCTTGGTGACGCCAATACTGCTAAAGATTCACACACCTTCATAGTCAAGTGGTTTAGGAGATTTCCACAATTCAGATCACACAAGTTCTACATTGCTGGCGAAAGCTATGGAGGGCACTACGTTCCACAACTCTCGGAGCTCATTTTCGACATGAATCTCAATCGTGCCAAGAAAGACTACATCAACTTCCAAGGATTCATGATTGGAAATGCAGCATTGGACGACGAAACAGATCAAAAGGGTTTGGTAGAGTATGCCTGGGATCATGGAGTGATATCTGATGCGTTATACCATAACCTTACAACCCAATGCGATTTCAGAAGACGAAATCAATCAGATGAATGCAGAGACGACATGGTTAAGTTCTTCGAGGCGTATGACGTTATTGACATGTATAGCTTGTACACTCCCACATGTCTCGTCGACATCGATAGCACAGCCCCTGTCGTCAGAACCCCACGAACCTTTTCCAAACTCAACGAGTGGCGTAGAAAACCAGCAGGCTATGATCCCTGTGCATCCGATTACACTGATGTTTACCTAAACAGGCCAGAAGTCCAAAACGCACTACATGCCAATGTCACCAATATTTCCTATCCATGGACTCACTGCGGTAGCATCGTTTGGAATGAGTCACCACCTTCCATCCTTCCTGTCATCAAGAAGCTTGTAGCTGGTGGTCTTCGCATTTGGGTTTTCAGTGGAGATACAGATGGAAGAGTTCCTGTGACTGGAACCAGATACACTCTCAAAAAGTTGGGCCTCCCCATTGTTCAAGATTGGACTCCCTGGTACACTAGCCAACAGGTAGGAGGGTGGAGAATGGTGTATGAAGGACTTACTTTTGTGACCATAAGAGGTGCTGGGCATGAAGTTCCAGTCTACACTCCCAAACCAGCTCTGCAGATGCTACGACACTTCCTTGCAAATAAGCAATTACCATCTAAACCAATTTAA	1446	0.4447	MALSSLISNILLLLLLSFTKAALAASKLSVSDHDNYLSREVLAEQEADRVYGLPGQPPVKFRQYAGYITVNETNGRALFYWFFEATHKPHKKPVLLWLNGGPGCSSIGYGEAEELGPFFPQDSSKPKLMLNPYSWNNAANLLFLESPVGVGFSYTNTSKDLDELGDANTAKDSHTFIVKWFRRFPQFRSHKFYIAGESYGGHYVPQLSELIFDMNLNRAKKDYINFQGFMIGNAALDDETDQKGLVEYAWDHGVISDALYHNLTTQCDFRRRNQSDECRDDMVKFFEAYDVIDMYSLYTPTCLVDIDSTAPVVRTPRTFSKLNEWRRKPAGYDPCASDYTDVYLNRPEVQNALHANVTNISYPWTHCGSIVWNESPPSILPVIKKLVAGGLRIWVFSGDTDGRVPVTGTRYTLKKLGLPIVQDWTPWYTSQQVGGWRMVYEGLTFVTIRGAGHEVPVYTPKPALQMLRHFLANKQLPSKPI*	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g0286	481	SUPERFAMILY	alpha/beta-Hydrolases	45	476	IPR029058	-
	Pvu11g0286	481	Gene3D	-	335	371	-	-
	Pvu11g0286	481	ProSitePatterns	Serine carboxypeptidases, histidine active site.	443	460	IPR033124	GO:0004185
	Pvu11g0286	481	ProSitePatterns	Serine carboxypeptidases, serine active site.	194	201	IPR018202	GO:0004185
	Pvu11g0286	481	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	23	480	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	PRINTS	Carboxypeptidase C serine protease (S10) family signature	131	143	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	PRINTS	Carboxypeptidase C serine protease (S10) family signature	144	154	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	PRINTS	Carboxypeptidase C serine protease (S10) family signature	180	205	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	PRINTS	Carboxypeptidase C serine protease (S10) family signature	443	456	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	Pfam	Serine carboxypeptidase	54	473	IPR001563	GO:0004185\|GO:0006508
	Pvu11g0286	481	Gene3D	alpha/beta hydrolase	44	304	IPR029058	-
	Pvu11g0286	481	PANTHER	CARBOXYPEPTIDASE	23	480	-	-
	Pvu11g0286	481	Gene3D	-	379	472	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g0286	Pvu-Chr11	2241823	2244881	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu11g0286	343	476	Calmodulin-binding Proteins	AT2G22960	30.147	2.99e-14	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g0286	K16297		-	gmx:100797264	755.362