Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0284 ATGAAGCTGAAGGCCTCCATAACCAAGCCCTTCAAAATCCCCTTATCCTATCTTCAGTGTTCATTTGAGTTTGCATCACTTTTCTTCTTCTCTCCCTCAAATCCCAAACGGAACAAACCTTTCTTTCATCACAAAATGGCTTCAACAACTTTAACAACCCTTACCCTTCGCTCCCTATCTTGTCCTACACCCTCCTCTTACCCTGCGCACCTCTCCGCCAAACCCTCTCTCCAATTCCCCAACATCTTCCACCGCGCCACCACCGCCACGCGCCGGGCCCGCATCGTCGTCTCTGCCGTCGAAGCGCCGGAGAAAATCACTAAGCTCGGCGACGAAATCGCCGGACTCACCCTCGAGGAGGCGAAGAACCTCGTGGACTTCCTCCAGGACAAACTCGGGGTCTCCGCAGCGGCCTTTGCTCCCGTTGCCGTAGCTGCTCCCGGAGGAGCTGCGGCGGATGCGGCGCCGGTGGTGGAGGAGAAGACGGAGTTCGATGTGGTGATCGAGGAGGTGCCGAGCAACGCGAGAATAGCGGTGATTAAGTCTGTAAGAGCGTTGACGAGCCTGGCGCTGAAGGAGGCGAAGGAGTTGATCGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGGTTTCGAAGGAAGAAGCTGAAGATGCGAAGAAGCAACTTGAAGAAGCTGGTGCAAAGATTGCCATTGTTTAG 696 0.5489 MKLKASITKPFKIPLSYLQCSFEFASLFFFSPSNPKRNKPFFHHKMASTTLTTLTLRSLSCPTPSSYPAHLSAKPSLQFPNIFHRATTATRRARIVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAPGGAAADAAPVVEEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAIV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0284 231 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 105 166 IPR036235 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 Gene3D Single helix bin 105 159 IPR036235 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 Gene3D - 160 230 IPR014719 -
Pvu11g0284 231 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 46 230 - -
Pvu11g0284 231 Pfam Ribosomal protein L7/L12 C-terminal domain 164 230 IPR013823 GO:0003735|GO:0006412
Pvu11g0284 231 Pfam Ribosomal protein L7/L12 dimerisation domain 105 154 IPR008932 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 Hamap 50S ribosomal protein L7/L12 [rplL]. 99 231 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 SUPERFAMILY ClpS-like 159 230 IPR014719 -
Pvu11g0284 231 PANTHER 39S RIBOSOMAL PROTEIN L12 46 230 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 TIGRFAM L12: ribosomal protein bL12 107 230 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pvu11g0284 231 CDD Ribosomal_L7_L12 104 230 IPR000206 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0284 K02935 - gmx:100779891 281.182