Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0281 ATGGTCCAACCGGCGATGACGCAGTTCCTCAACTCCGTCCTCTCCCAGCGCGGCCCCTCCGCCGTCCCTTACTCCGAGGACACCAAGTGGCTCATCCGCCAGCACCTGGTGGCGCTCACCACCGCCTTCCCTTCGCTCGAGCCCAAAACGGCCTCCTTCACGCACAACGACGGTCGCTCCGTCAACCTCCTTCAGGCCGACGGCACCATCCCCATGACGTTCCAAGGCGTCACCTACAACATCCCCGTCGTCATCTGGCTCATGGAGTCCTACCCCCGCCACCCGCCCTGCGTCTACGTGAATCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTAACGTTAACCCTTCTGGTTTGGTTTCCGTCCCTTACTTGCAGAATTGGACCTACCCTAGTTCCAACCTTGTTGATCTCATTCTCAATCTTAGCCTCCACTTCGGTCGTGACCCTCCCCTCTATTCCCAACGCAGACCGAACCCTAATTCAAACCCAAACCCAAACCCAAACCCAAACCCCAACCCCAATCCAATTCCTCACCCTCACCCCCATCCCAGTTTCGGAAACTCTTCTTCCAATTTATCTTCTTCTTCTTCTTCATCTGGCTACCCCCACCCTCACCCCCCTTCTAGGACTTACCCTCCTTCCCCTTACCCTGCTCCCGCTTCTAGGGTTCAGACCACGGAGGATCCTTCGGAGGTTTTCAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTTCATGGCGATGTTTCCGCGTTGAGGAAGACCAGGGAGGGTGAGATGGAGGGGCTGTTTGGTTTGCAGGGCGTGTTAAAGCAGCGGGAGGAGAGTCTCAACAGGGGGTTGAAGGAGATGCAGGAGGAGATGGAGGCGCTGGAGCAGCAGTTGCAGATTGTGTTGATGAACACTGATGTTTTGGAGGGGTGGTTGAGGGATAACCAGGGGAAGAAGATGGGGAGTTTGGACAATCCTGAGGAGGCTTTTGAGTGTGTGGATGCTCTCTCCAAGCAGATGCTTGACTGCACTGCTTCTGATTTGGCTATCGAGGACACGCTTTATGCCTTGGATAAGGCTCTTCAGGTGGGGGCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGGCGCTGTCCAGAGAGCAGTTCTTTCACCGCGCCACCACGGCGAAAGTTAGAGCGGCTCAGTTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAATCACCATTATGGTAGCTGA 1239 0.5601 MVQPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTTAFPSLEPKTASFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPNVNPSGLVSVPYLQNWTYPSSNLVDLILNLSLHFGRDPPLYSQRRPNPNSNPNPNPNPNPNPNPIPHPHPHPSFGNSSSNLSSSSSSSGYPHPHPPSRTYPPSPYPAPASRVQTTEDPSEVFKRNAINKLVEMVHGDVSALRKTREGEMEGLFGLQGVLKQREESLNRGLKEMQEEMEALEQQLQIVLMNTDVLEGWLRDNQGKKMGSLDNPEEAFECVDALSKQMLDCTASDLAIEDTLYALDKALQVGAVPFDQYLRSVRALSREQFFHRATTAKVRAAQLQAQVANMAARNHHYGS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0281 412 PANTHER PROTEIN ELC 179 407 - -
Pvu11g0281 412 PANTHER PROTEIN ELC 6 174 - -
Pvu11g0281 412 MobiDBLite consensus disorder prediction 162 184 - -
Pvu11g0281 412 MobiDBLite consensus disorder prediction 185 206 - -
Pvu11g0281 412 Gene3D - 334 394 - -
Pvu11g0281 412 MobiDBLite consensus disorder prediction 152 232 - -
Pvu11g0281 412 ProSiteProfiles UEV domain profile. 13 157 IPR008883 GO:0015031|GO:0036211
Pvu11g0281 412 SUPERFAMILY Endosomal sorting complex assembly domain 333 393 IPR037202 -
Pvu11g0281 412 ProSiteProfiles Steadiness box (SB) domain profile. 333 401 IPR017916 -
Pvu11g0281 412 Gene3D Ubiquitin Conjugating Enzyme 1 154 IPR016135 -
Pvu11g0281 412 MobiDBLite consensus disorder prediction 207 221 - -
Pvu11g0281 412 SUPERFAMILY UBC-like 15 153 IPR016135 -
Pvu11g0281 412 Pfam Vps23 core domain 327 390 IPR017916 -
Pvu11g0281 412 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 179 407 - -
Pvu11g0281 412 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 6 174 - -
Pvu11g0281 412 Coils Coil 276 303 - -
Pvu11g0281 412 Pfam UEV domain 33 153 IPR008883 GO:0015031|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0281 K12183 - gmx:100778834 668.692