Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0274 ATGGCCGATATCAGTTCCGTCGATGCTTCTTTGTGGTGGGACTCATTCACCGTGCTCCTCGCAGAGCTTGAGAATTCCTCTATGTCCTCAGATCTCCCACCTAACTTGACGAAGAAGTTGAAGGACAACCATGCGTGGTTCGTAGACACACTTTCGCGCTTCAAACCGCCCAATCAGAGTTCCAAGCAAGCTCTGAATTCAAAAACGCTGAAAATTGGATCTCACCAGCTCTCTGTTCAGCCTCACCTGAAAGATAAAGCGTTGCAGATTAGCTCCATCCTGCTACTAGACGAGGTTCAATCATACATTTTTGTTGAAAGGTCCGTCAAACATAACGATGCAGCTGCTGATTCCATGTCTCCAGAGTTCCTTCACATGATGTTAATTCAATATTACAAGGAGCGACAGTGCTTGCTAAAGTGCATCAGGTGGATTCTCATGCATGCCATACATAATGGTCCTGTGTCTGAAGATAATACTATGAAGGAGGAGGCAAGAAAATTGTTTCATGATGGTCTTGAAAGTAAATTAATATTGTTCTTTGAGAATCTTCTGTCTTGTAGCTACCCAGAACAAATGGATGTTGAGCTTTTTACTCTGTGGGCTGAGGAGACTCTAATTGAAGACAACTTGGTTTTAGACATCCTTTTCTTGGCATATTATGACTCATTTTGTACCTGTAGTGGGGAAATATGGAAGAAGTTTGGTTCTCTTTACAAGGGGATCTTAGCTGGTGATTATAACTTGGGAAAACTAGCAATTACTACGGAAACACAACAATTGTCTTATCATGCTAAAGTTCAGCTGCTGCTTATTTTAATCGAAAACCTGAACCTGGAGAATGTTCTTCAAATGGTTCATGATGAAGTACCATATAGGAAAGGCGTGTCTACTTTTTCCATGACTGATGTCCAAGAGATGGATGCACTAGTTTCTACTTTCAATGCTTTTGAAATGAATGAAGCTGGTCCTCTAGTTTTAGCTTGGGCTGTATTTCTCTATCTACTCTTGACACTTCTGGAGAAAGATGAAAACAATGAGCTAATGGAGATTGATCACATTAGTTATGTCCGTCAAGCCTTCGAAGCTGGATCCTTGCGTTATTGTCTTGAAATCCTTGAATGTGACATTTTGAAGGATTATGATGGCCCAATGTCTGGATATCGCGGTGTTTTGAGGACATTCATTTCTGCATTCATTGCATCTTATGAAATCAACCTTCAGCCAGATGATGGTAACCCCACTCTAATACTGGATATTCTATGCAAGATTTATCGTGGAGAGGAATCATTATGTATTCAGTTTTGGGACAAGGAAAGTTTTATTGATGGTCCAATTCGGTCTCTTCTTTGCAACCTAGAGAGTGAGTTTCCTTTCAGGAGCATTGAACTTGTTCGACTCCTGTCATCCCTTAGTGAAGGAACTTGGCCGGCAGAGTGTGTGTATAACTTTCTAAATAGGTCTGTTGGTATATCATCTTTGTTTGAGATTAATAGTGATTCACAGATAGTTGAAGCACAACAGCCAGTGCGAGTTCCTGGGGTTGAAGGTTTCTTTATTCCGGCTGGAACTCATGGGCGCATCTTAAGAGTTGTTGGAGAAAATACTGCCCTTGTACGATGGGAGTATTCATCATCTGGAATGTTTGTATTACTCTTACATTTGGCCCAAGAAATGTATTTGGATAACAAGGATGAAGTTGCTTTTACACTTGACCTGCTTAGTAGATTGGTGTCCTTTAATACTGGTATTTGCTTTGCTGTGATGGACATCAGCAACTCTTTGCAATTTGATGCTGTTGACTTGATGAATGAGCAGGTTGAAAAGAGGGTCTGGGTGGTTGAGATAGTTTGCAATTTAATTAAAAAACTGCCTCTGAATTCCTCTGGTGCCGTGCTTATGTCAATGGGTATCAAGATTTTAGCCATTATGTTGATTTGTTCTCCATCTATCGTTGCAACGGCTACTCTAAAGGCAAACCTGTTTGATATGACTTTGCAGACACCTGTGTTCAATGTAGGCAGTAATGGCTTATCAAGTGGGTCATGGTTGCTTTCTTGCAAACTGGCTAGGATGCTTTTAATTGACTGTGAGCAAAGCAGTAATGATTGCCCCTTGGCAATATCAGTGCTGGACTTCACTATACAGCTTGTAGAAACAGGAGTAGAGCATGATGATCTGCTGGCATTGATCATTTTCTCTTTGCAGTATGTTCTTGTCAATCACGAATATTGGAAATACAAGATGAAGCATATTAGATGGAAAATAACACTGAAG 2277 0.4062 MADISSVDASLWWDSFTVLLAELENSSMSSDLPPNLTKKLKDNHAWFVDTLSRFKPPNQSSKQALNSKTLKIGSHQLSVQPHLKDKALQISSILLLDEVQSYIFVERSVKHNDAAADSMSPEFLHMMLIQYYKERQCLLKCIRWILMHAIHNGPVSEDNTMKEEARKLFHDGLESKLILFFENLLSCSYPEQMDVELFTLWAEETLIEDNLVLDILFLAYYDSFCTCSGEIWKKFGSLYKGILAGDYNLGKLAITTETQQLSYHAKVQLLLILIENLNLENVLQMVHDEVPYRKGVSTFSMTDVQEMDALVSTFNAFEMNEAGPLVLAWAVFLYLLLTLLEKDENNELMEIDHISYVRQAFEAGSLRYCLEILECDILKDYDGPMSGYRGVLRTFISAFIASYEINLQPDDGNPTLILDILCKIYRGEESLCIQFWDKESFIDGPIRSLLCNLESEFPFRSIELVRLLSSLSEGTWPAECVYNFLNRSVGISSLFEINSDSQIVEAQQPVRVPGVEGFFIPAGTHGRILRVVGENTALVRWEYSSSGMFVLLLHLAQEMYLDNKDEVAFTLDLLSRLVSFNTGICFAVMDISNSLQFDAVDLMNEQVEKRVWVVEIVCNLIKKLPLNSSGAVLMSMGIKILAIMLICSPSIVATATLKANLFDMTLQTPVFNVGSNGLSSGSWLLSCKLARMLLIDCEQSSNDCPLAISVLDFTIQLVETGVEHDDLLALIIFSLQYVLVNHEYWKYKMKHIRWKITLK 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0274 759 Pfam Nucleoporin subcomplex protein binding to Pom34 36 757 IPR018864 GO:0017056
Pvu11g0274 759 PANTHER NUCLEOPORIN NUP188 HOMOLOG 3 759 IPR044840 GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0274 K14311 - pvu:PHAVU_011G0268001 1452.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0274 11 2171771 2183673 Pvu11g0274 11 2171771 2183673 ECH